RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 C17orf64Q86WR6 236 aa14.19□□□□□ -0.14
CACNB3-220ENST00000551716 CXorf67Q86X51 503 aaPredicted RBP14.19□□□□□ -0.14
CACNB3-220ENST00000551716 TBC1D19Q8N5T2 526 aa14.19□□□□□ -0.14
CACNB3-220ENST00000551716 MFSD9Q8NBP5 474 aa14.19□□□□□ -0.14
CACNB3-220ENST00000551716 SGCZQ96LD1 299 aa14.19□□□□□ -0.14
CACNB3-220ENST00000551716 CCDC138Q96M89 665 aa14.19□□□□□ -0.14
CACNB3-220ENST00000551716 ETNK1Q9HBU6 452 aa14.19□□□□□ -0.14
CACNB3-220ENST00000551716 KLHL42Q9P2K6 505 aa14.19□□□□□ -0.14
CACNB3-220ENST00000551716 VPS9D1Q9Y2B5 631 aa14.19□□□□□ -0.14
CACNB3-220ENST00000551716 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.19□□□□□ -0.14
CACNB3-220ENST00000551716 TRGV5A0A0B4J1U4 118 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 ATP6AP2A0A1C7CYW4 349 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 A8MUA0 341 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 GFYI3L273 518 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 SLC16A5O15375 505 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 LCMT2O60294 686 aaKnown RBP14.18□□□□□ -0.14
CACNB3-220ENST00000551716 SMPD2O60906 423 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 ATP6AP2O75787 350 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 MYO1DO94832 1006 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 BMP7P18075 431 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 MAOAP21397 527 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 COILP38432 576 aaPredicted RBP14.18□□□□□ -0.14
CACNB3-220ENST00000551716 GDF10P55107 478 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 KCNJ11Q14654 390 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 SF3B4Q15427 424 aaKnown RBP eCLIP14.18□□□□□ -0.14
CACNB3-220ENST00000551716 BBS9Q3SYG4 887 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 HECTD2Q5U5R9 776 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 RTL4Q6ZR62 310 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 LUZP1Q86V48 1076 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 RELL2Q8NC24 303 aaPredicted RBP14.18□□□□□ -0.14
CACNB3-220ENST00000551716 ZNF740Q8NDX6 193 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 LPGAT1Q92604 370 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 FAM136AQ96C01 138 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 TREX1Q9NSU2 369 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 ZFATQ9P243 1243 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 MYOTQ9UBF9 498 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 LIPGQ9Y5X9 500 aa14.18□□□□□ -0.14
CACNB3-220ENST00000551716 SYNDIG1LA6NDD5 238 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 AHRRA9YTQ3 701 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 AP3B1O00203 1094 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 NDUFS4O43181 175 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 CEP104O60308 925 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 OR2J2O76002 312 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 MPC1LP0DKB6 136 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 RNH1P13489 461 aaKnown RBP14.17□□□□□ -0.14
CACNB3-220ENST00000551716 ENO3P13929 434 aaPredicted RBP14.17□□□□□ -0.14
CACNB3-220ENST00000551716 CCND1P24385 295 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 IMPA1P29218 277 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 TIMP3P35625 211 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 GRIA1P42261 906 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 RGS1Q08116 209 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 PHKG1Q16816 387 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 CIARTQ8N365 385 aaPredicted RBP14.17□□□□□ -0.14
CACNB3-220ENST00000551716 GPATCH11Q8N954 259 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 GOLM1Q8NBJ4 401 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 SLC35B2Q8TB61 432 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 ZNF592Q92610 1267 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 CNPPD1Q9BV87 410 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 SACM1LQ9NTJ5 587 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 ADAM21Q9UKJ8 722 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 CRYL1Q9Y2S2 319 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 MMACHCQ9Y4U1 282 aa14.17□□□□□ -0.14
CACNB3-220ENST00000551716 URADA6NGE7 173 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 RNF212BA8MTL3 300 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 SMAD7O15105 426 aaKnown RBP14.16□□□□□ -0.14
CACNB3-220ENST00000551716 OR6B1O95007 311 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 EPPINO95925 133 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 IL2RAP01589 272 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 HRGP04196 525 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 CEACAM8P31997 349 aaPredicted RBP14.16□□□□□ -0.14
CACNB3-220ENST00000551716 OLR1P78380 273 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 HYAL2Q12891 473 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 FAM47EQ6ZV65 393 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 STRA8Q7Z7C7 330 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 ULK2Q8IYT8 1036 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 LINC01560Q8TB33 94 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 SMPDL3BQ92485 455 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 NCLNQ969V3 563 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 Q96MF0 132 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 DACH2Q96NX9 599 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 AARSD1Q9BTE6 412 aaKnown RBP14.16□□□□□ -0.14
CACNB3-220ENST00000551716 IL22Q9GZX6 179 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 NECTIN3Q9NQS3 549 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 GALPQ9UBC7 116 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 TRPS1Q9UHF7 1281 aa14.16□□□□□ -0.14
CACNB3-220ENST00000551716 SCN3AQ9NY46 2000 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 MXRA5Q9NR99 2828 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 MPDZO75970 2070 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 OR1F1O43749 312 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 DNAJB6O75190 326 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 CRLF1O75462 422 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 VAPBO95292 243 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 P04436 131 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 CCR8P51685 355 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 GPR143P51810 404 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 TBPL1P62380 186 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 FOXO1Q12778 655 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 TBL3Q12788 808 aaKnown RBP14.15□□□□□ -0.14
CACNB3-220ENST00000551716 XKR6Q5GH73 641 aa14.15□□□□□ -0.14
CACNB3-220ENST00000551716 C16orf47Q6ZP98 133 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms