RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 CYP2A7P20853 494 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 MAPK3P27361 379 aaPredicted RBP4.92□□□□□ -1.62
CPSF6-206ENST00000550987 PIK3R1P27986 724 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 EPHA2P29317 976 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 PEX19P40855 299 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 SERPINH1P50454 418 aaKnown RBP4.92□□□□□ -1.62
CPSF6-206ENST00000550987 NOVA1P51513 510 aaKnown RBP4.92□□□□□ -1.62
CPSF6-206ENST00000550987 BRWD1-AS2P59051 145 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 KLC1Q07866 573 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ZNF415Q09FC8 603 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 WASHC5Q12768 1159 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ODF4Q2M2E3 257 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 AARDQ4LEZ3 155 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 PARP10Q53GL7 1025 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ZNF425Q6IV72 752 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 C11orf87Q6NUJ2 197 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 LINGO4Q6UY18 593 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ANKRD33Q7Z3H0 272 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ZNF554Q86TJ5 538 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 CNTN4Q8IWV2 1026 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 APCDD1Q8J025 514 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 SFRP1Q8N474 314 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 DNAJC22Q8N4W6 341 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 RBMXL3Q8N7X1 1067 aaKnown RBP4.92□□□□□ -1.62
CPSF6-206ENST00000550987 RTL3Q8N8U3 475 aaKnown RBP4.92□□□□□ -1.62
CPSF6-206ENST00000550987 BMPERQ8N8U9 685 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 FGFBP3Q8TAT2 258 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 RSPH1Q8WYR4 309 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 C5orf30Q96GV9 206 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 NSL1Q96IY1 281 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ADGRG7Q96K78 797 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 MYCBPQ99417 103 aaPredicted RBP4.92□□□□□ -1.62
CPSF6-206ENST00000550987 SPXQ9BT56 116 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 IDI2Q9BXS1 227 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ABCG8Q9H221 673 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 APOBEC3GQ9HC16 384 aaKnown RBP4.92□□□□□ -1.62
CPSF6-206ENST00000550987 RAB9BQ9NP90 201 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 ANO10Q9NW15 660 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 SPHK1Q9NYA1 384 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 FETUBQ9UGM5 382 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 SLC7A7Q9UM01 511 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 GRIN2DO15399 1336 aa4.92□□□□□ -1.62
CPSF6-206ENST00000550987 NID2Q14112 1375 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 A0A0A6YYC8 382 aaPredicted RBP4.91□□□□□ -1.62
CPSF6-206ENST00000550987 DNAJC9-AS1A6NH13 148 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 TMEM150CB9EJG8 249 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 C19orf81C9J6K1 198 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 I3L1I5 382 aaPredicted RBP4.91□□□□□ -1.62
CPSF6-206ENST00000550987 LRP3O75074 770 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 SEC22BO75396 215 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 PDE9AO76083 593 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 GLCEO94923 617 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 MOCS2O96007 188 aaPredicted RBP4.91□□□□□ -1.62
CPSF6-206ENST00000550987 HLA-DOBP13765 273 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 DAOP14920 347 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 CCKBRP32239 447 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 THOP1P52888 689 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 CDH11P55287 796 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 C21orf58P58505 322 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 YBEYP58557 167 aaPredicted RBP4.91□□□□□ -1.62
CPSF6-206ENST00000550987 IL1RL1Q01638 556 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 AKAP17AQ02040 695 aaKnown RBP4.91□□□□□ -1.62
CPSF6-206ENST00000550987 MBTD1Q05BQ5 628 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 PPA1Q15181 289 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 CCL14Q16627 93 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 FAM46CQ5VWP2 391 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 CREB3L2Q70SY1 520 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 RABEPKQ7Z6M1 372 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 MEX3DQ86XN8 651 aaKnown RBP4.91□□□□□ -1.62
CPSF6-206ENST00000550987 SIAH3Q8IW03 269 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 TTC5Q8N0Z6 440 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 OR11H4Q8NGC9 324 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 CKAP2Q8WWK9 683 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 SNRNP40Q96DI7 357 aaKnown RBP4.91□□□□□ -1.62
CPSF6-206ENST00000550987 MRPL38Q96DV4 380 aaKnown RBP4.91□□□□□ -1.62
CPSF6-206ENST00000550987 EEF2KMTQ96G04 330 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 CFAP36Q96G28 342 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 RUFY1Q96T51 708 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 TEX13AQ9BXU3 409 aaPredicted RBP4.91□□□□□ -1.62
CPSF6-206ENST00000550987 ZMYND12Q9H0C1 365 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 TCF7L2Q9NQB0 619 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 IL19Q9UHD0 177 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 TDRKHQ9Y2W6 561 aaKnown RBP4.91□□□□□ -1.62
CPSF6-206ENST00000550987 PCSK5Q92824 1860 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 ACACAQ13085 2346 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 FRMPD4Q14CM0 1322 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 NIPBLQ6KC79 2804 aaeCLIP4.91□□□□□ -1.62
CPSF6-206ENST00000550987 MED13LQ71F56 2210 aa4.91□□□□□ -1.62
CPSF6-206ENST00000550987 APC2O95996 2303 aa4.9□□□□□ -1.62
CPSF6-206ENST00000550987 ILVBLA1L0T0 632 aa4.9□□□□□ -1.63
CPSF6-206ENST00000550987 C5orf60A6NFR6 353 aa4.9□□□□□ -1.63
CPSF6-206ENST00000550987 CASTOR2A6NHX0 329 aa4.9□□□□□ -1.63
CPSF6-206ENST00000550987 CCDC69A6NI79 296 aa4.9□□□□□ -1.63
CPSF6-206ENST00000550987 C4orf47A7E2U8 309 aa4.9□□□□□ -1.63
CPSF6-206ENST00000550987 ARPC2O15144 300 aa4.9□□□□□ -1.63
CPSF6-206ENST00000550987 SYNGR3O43761 229 aa4.9□□□□□ -1.63
CPSF6-206ENST00000550987 VEGFDO43915 354 aa4.9□□□□□ -1.63
CPSF6-206ENST00000550987 STAM2O75886 525 aa4.9□□□□□ -1.63
CPSF6-206ENST00000550987 BCAS2O75934 225 aaPredicted RBP4.9□□□□□ -1.63
CPSF6-206ENST00000550987 SERPING1P05155 500 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms