RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 OCA2Q04671 838 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 GABPB1Q06547 395 aaPredicted RBP10.57□□□□□ -0.72
RAB5B-208ENST00000550283 RGS1Q08116 209 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 NFATC3Q12968 1075 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 PCOLCEQ15113 449 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 RASA2Q15283 850 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 ZRSR2Q15696 482 aaKnown RBP10.57□□□□□ -0.72
RAB5B-208ENST00000550283 CPSF6Q16630 551 aaKnown RBP eCLIP10.57□□□□□ -0.72
RAB5B-208ENST00000550283 HSP90B2PQ58FF3 399 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 ZNF678Q5SXM1 525 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 LGSNQ5TDP6 509 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 CES4AQ5XG92 561 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 MED27Q6P2C8 311 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 TMEM205Q6UW68 189 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 TRABD2AQ86V40 505 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 RAB43Q86YS6 212 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 MYLK4Q86YV6 388 aaPredicted RBP10.57□□□□□ -0.72
RAB5B-208ENST00000550283 PARP9Q8IXQ6 854 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 KRT78Q8N1N4 520 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 L3MBTL4Q8NA19 623 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 OR4F6Q8NGB9 312 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 TRPC4APQ8TEL6 797 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 UCN3Q969E3 161 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 HBEGFQ99075 208 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 C17orf62Q9BQA9 187 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 CCDC77Q9BR77 488 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 C1QTNF3Q9BXJ4 246 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 CAPS2Q9BXY5 557 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 GSTO2Q9H4Y5 243 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 ACTR8Q9H981 624 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 VIPAS39Q9H9C1 493 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 MLXIPLQ9NP71 852 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 MKKSQ9NPJ1 570 aaPredicted RBP10.57□□□□□ -0.72
RAB5B-208ENST00000550283 DMRT3Q9NQL9 472 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 NECTIN3Q9NQS3 549 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 LGALS13Q9UHV8 139 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 CDC14AQ9UNH5 594 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 CSAG2Q9Y5P2 127 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 ZNF462Q96JM2 2506 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 NUP210LQ5VU65 1888 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 SCN2AQ99250 2005 aa10.57□□□□□ -0.72
RAB5B-208ENST00000550283 PLPP1O14494 284 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 B4GALT2O60909 372 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 SMIM24O75264 130 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 CDH16O75309 829 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 SPAG7O75391 227 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 PRKRAO75569 313 aaKnown RBP10.56□□□□□ -0.72
RAB5B-208ENST00000550283 OR4F21O95013 312 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 PIM1P11309 404 aaPredicted RBP10.56□□□□□ -0.72
RAB5B-208ENST00000550283 CHN1P15882 459 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 MAOAP21397 527 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 PRKAA2P54646 552 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 HERC3Q15034 1050 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 RBBP7Q16576 425 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 MINDY4Q4G0A6 757 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 ZYG11AQ6WRX3 759 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 RIPOR1Q6ZS17 1223 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 ANKRD37Q7Z713 158 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 IQCKQ8N0W5 287 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 BANPQ8N9N5 519 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 OR2L5Q8NG80 312 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 GAL3ST3Q96A11 431 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 ZIM3Q96PE6 472 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 KCNA7Q96RP8 456 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 FAM117AQ9C073 453 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 REXO4Q9GZR2 422 aaKnown RBP10.56□□□□□ -0.72
RAB5B-208ENST00000550283 ZNF160Q9HCG1 818 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 SEMA3GQ9NS98 782 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 KCMF1Q9P0J7 381 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 NXT1Q9UKK6 140 aaKnown RBP10.56□□□□□ -0.72
RAB5B-208ENST00000550283 ANGPTL3Q9Y5C1 460 aa10.56□□□□□ -0.72
RAB5B-208ENST00000550283 LOC102723996A0A087X1L8 192 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 IGHV1-45A0A0A0MS14 117 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 ARHGAP10A1A4S6 786 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 ANKDD1BA6NHY2 528 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 EIF4E1BA6NMX2 242 aaKnown RBP10.55□□□□□ -0.72
RAB5B-208ENST00000550283 H0YIV9 168 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 POLR3GO15318 223 aaPredicted RBP10.55□□□□□ -0.72
RAB5B-208ENST00000550283 EEDO75530 441 aaKnown RBP10.55□□□□□ -0.72
RAB5B-208ENST00000550283 SEC24DO94855 1032 aaPredicted RBP10.55□□□□□ -0.72
RAB5B-208ENST00000550283 CLDN9O95484 217 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 GBAP04062 536 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 HEXBP07686 556 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 FHP07954 510 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 GSTA1P08263 222 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 ATP5F1P24539 256 aaPredicted RBP10.55□□□□□ -0.72
RAB5B-208ENST00000550283 CXCR2P25025 360 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 ARRB2P32121 409 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 CRHR1P34998 444 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 FOXA1P55317 472 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 HERVK_113P63132 956 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 PCLAFQ15004 111 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 SGO1Q5FBB7 561 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 MFSD4BQ5TF39 518 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 LIPJQ5W064 366 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 ABHD13Q7L211 337 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 SRRM1Q8IYB3 904 aaKnown RBP10.55□□□□□ -0.72
RAB5B-208ENST00000550283 TBC1D19Q8N5T2 526 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 FAM47BQ8NA70 645 aa10.55□□□□□ -0.72
RAB5B-208ENST00000550283 C9orf43Q8TAL5 461 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms