RNA–Protein interactions for RNA: ENST00000549414.6

CUX1-213, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-213ENST00000549414 PRDM8Q9NQV8 689 aa15.66■□□□□ 0.1
CUX1-213ENST00000549414 GIN1Q9NXP7 522 aa15.66■□□□□ 0.1
CUX1-213ENST00000549414 CALML5Q9NZT1 146 aa15.66■□□□□ 0.1
CUX1-213ENST00000549414 SPIN1Q9Y657 262 aaPredicted RBP15.66■□□□□ 0.1
CUX1-213ENST00000549414 ARFGEF1Q9Y6D6 1849 aa15.66■□□□□ 0.1
CUX1-213ENST00000549414 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.65■□□□□ 0.1
CUX1-213ENST00000549414 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.65■□□□□ 0.1
CUX1-213ENST00000549414 TLR4O00206 839 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 CLDN4O14493 209 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 SNPHO15079 494 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 TLX2O43763 284 aaPredicted RBP15.65■□□□□ 0.1
CUX1-213ENST00000549414 HCN1O60741 890 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 CRTC2Q53ET0 693 aaPredicted RBP15.65■□□□□ 0.1
CUX1-213ENST00000549414 COQ5Q5HYK3 327 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 FAM92BQ6ZTR7 304 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 ZNF689Q96CS4 500 aaPredicted RBP15.65■□□□□ 0.1
CUX1-213ENST00000549414 GPR78Q96P69 363 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 PTBP2Q9UKA9 531 aaKnown RBP15.65■□□□□ 0.1
CUX1-213ENST00000549414 RPLP0P05388 317 aaKnown RBP15.65■□□□□ 0.1
CUX1-213ENST00000549414 HMGA1P17096 107 aaKnown RBP15.65■□□□□ 0.1
CUX1-213ENST00000549414 CTGFP29279 349 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 ATP12AP54707 1039 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 SPATS1Q496A3 300 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 KRT74Q7RTS7 529 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 LILRA2Q8N149 483 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 CBARPQ8N350 705 aaPredicted RBP15.65■□□□□ 0.1
CUX1-213ENST00000549414 OR10H4Q8NGA5 316 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 PMEPA1Q969W9 287 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 RNF31Q96EP0 1072 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 A8MUA0 341 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 B4GAT1O43505 415 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 C8BP07358 591 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 OR12D1P0DN82 309 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 BMP2P12643 396 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 ERVFC1P60507 584 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 MLLT1Q03111 559 aaPredicted RBP15.65■□□□□ 0.1
CUX1-213ENST00000549414 SELPLGQ14242 412 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 GRHL3Q8TE85 626 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 SLC2A11Q9BYW1 496 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 NEUROD4Q9HD90 331 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 EVA1BQ9NVM1 165 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 CLEC4EQ9ULY5 219 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 HEBP2Q9Y5Z4 205 aa15.65■□□□□ 0.1
CUX1-213ENST00000549414 HAT1O14929 419 aa15.64■□□□□ 0.1
CUX1-213ENST00000549414 SRPRAP08240 638 aaKnown RBP15.64■□□□□ 0.1
CUX1-213ENST00000549414 PTGER1P34995 402 aa15.64■□□□□ 0.1
CUX1-213ENST00000549414 MZT2AQ6P582 158 aa15.64■□□□□ 0.1
CUX1-213ENST00000549414 ATP6V1C2Q8NEY4 427 aa15.64■□□□□ 0.1
CUX1-213ENST00000549414 BCL7CQ8WUZ0 217 aaPredicted RBP15.64■□□□□ 0.1
CUX1-213ENST00000549414 NEIL2Q969S2 332 aa15.64■□□□□ 0.1
CUX1-213ENST00000549414 DPH7Q9BTV6 452 aa15.64■□□□□ 0.1
CUX1-213ENST00000549414 IFT27Q9BW83 186 aa15.64■□□□□ 0.1
CUX1-213ENST00000549414 SLITRK2Q9H156 845 aa15.64■□□□□ 0.1
CUX1-213ENST00000549414 RIMS3Q9UJD0 308 aa15.64■□□□□ 0.1
CUX1-213ENST00000549414 A8MU76 341 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 MPZL2O60487 215 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 PRMT3O60678 531 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 TNFRSF21O75509 655 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 INMTO95050 263 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 IGLV3-25P01717 112 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 MYL9P24844 172 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 TACR1P25103 407 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 ZNF544Q6NX49 715 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 PARS2Q7L3T8 475 aaKnown RBP15.64■□□□□ 0.09
CUX1-213ENST00000549414 RANBP3LQ86VV4 465 aaPredicted RBP15.64■□□□□ 0.09
CUX1-213ENST00000549414 ZNF433Q8N7K0 673 aaPredicted RBP15.64■□□□□ 0.09
CUX1-213ENST00000549414 COX4I2Q96KJ9 171 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 FAM129BQ96TA1 746 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 ERVK-18Q9QC07 812 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 SLC30A4O14863 429 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 IFNGP01579 166 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 F11P03951 625 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 ASGR2P07307 311 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 PIK3CBP42338 1070 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 MC1RQ01726 317 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 TCEANCQ8N8B7 351 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 SLC22A18Q96BI1 424 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 SORBS1Q9BX66 1292 aaKnown RBP15.64■□□□□ 0.09
CUX1-213ENST00000549414 EBF1Q9UH73 591 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 IKZF2Q9UKS7 526 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 TRIP11Q15643 1979 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 A6NHS1 94 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 KLF8O95600 359 aaPredicted RBP15.64■□□□□ 0.09
CUX1-213ENST00000549414 ALOX5P09917 674 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 TFPTP0C1Z6 253 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 RPP38P78345 283 aaKnown RBP15.64■□□□□ 0.09
CUX1-213ENST00000549414 RUNX3Q13761 415 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 NXPE4Q6UWF7 544 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 LIPIQ6XZB0 460 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 OR2T11Q8NH01 316 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 IPCEF1Q8WWN9 437 aaPredicted RBP15.64■□□□□ 0.09
CUX1-213ENST00000549414 UCK2Q9BZX2 261 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 FAM118AQ9NWS6 357 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 SNX7Q9UNH6 387 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 TAF1LQ8IZX4 1826 aa15.64■□□□□ 0.09
CUX1-213ENST00000549414 CCDC182A6NF36 153 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 PLOD3O60568 738 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 MATN1P21941 496 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 C1orf61Q13536 156 aa15.63■□□□□ 0.09
CUX1-213ENST00000549414 C11orf88Q6PI97 169 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms