RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 KRT6AP02538 564 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 KRT6BP04259 564 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 IL6P05231 212 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 STSP08842 583 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 RRM2P31350 389 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 ETV3P41162 512 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 KIR3DL1P43629 444 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 KRT6CP48668 564 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 ACSM2AQ08AH3 577 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 EIF4HQ15056 248 aaKnown RBP10.65□□□□□ -0.7
LINC00661-204ENST00000549354 ZXDCQ2QGD7 858 aaPredicted RBP10.65□□□□□ -0.7
LINC00661-204ENST00000549354 ARSIQ5FYB1 569 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 CDKL4Q5MAI5 379 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 ACSM2BQ68CK6 577 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 ARMC8Q8IUR7 673 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 C1orf52Q8N6N3 182 aaKnown RBP10.65□□□□□ -0.7
LINC00661-204ENST00000549354 PJA1Q8NG27 643 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 STARD8Q92502 1023 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 IL17FQ96PD4 163 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 ZNF300Q96RE9 604 aaPredicted RBP10.65□□□□□ -0.7
LINC00661-204ENST00000549354 PKP4Q99569 1192 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 CD244Q9BZW8 370 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 TMEM184CQ9NVA4 438 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 THUMPD1Q9NXG2 353 aaKnown RBP10.65□□□□□ -0.7
LINC00661-204ENST00000549354 OARD1Q9Y530 152 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 CHD9Q3L8U1 2897 aa10.65□□□□□ -0.7
LINC00661-204ENST00000549354 LATO43561 262 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 CCDC159P0C7I6 412 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 PRKAG1P54619 331 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 RSBN1Q5VWQ0 802 aaPredicted RBP10.64□□□□□ -0.71
LINC00661-204ENST00000549354 ADCK2Q7Z695 626 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 TECPR1Q7Z6L1 1165 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 AKAP14Q86UN6 197 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 CNDP2Q96KP4 475 aaKnown RBP10.64□□□□□ -0.71
LINC00661-204ENST00000549354 APOL4Q9BPW4 351 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 REEP1Q9H902 201 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 C11orf16Q9NQ32 467 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 B3GNT3Q9Y2A9 372 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 MGAT4DA6NG13 374 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 YY2O15391 372 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 KCNK2O95069 426 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 NPPAP01160 153 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 FABP3P05413 133 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 ETFAP13804 333 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 SDC1P18827 310 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 PDHA2P29803 388 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 GRK3P35626 688 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 PRIM2P49643 509 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 KCNC4Q03721 635 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 FCHO2Q0JRZ9 810 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 TNFAIP8L2Q6P589 184 aaPredicted RBP10.64□□□□□ -0.71
LINC00661-204ENST00000549354 RASGRP3Q8IV61 690 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 OR8H2Q8N162 312 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 ZNF740Q8NDX6 193 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 TMIEQ8NEW7 156 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 UBTD2Q8WUN7 234 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 S100ZQ8WXG8 99 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 RAB8BQ92930 207 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 SH3GL1Q99961 368 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 YIPF4Q9BSR8 244 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 CENPOQ9BU64 300 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 CLMPQ9H6B4 373 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 SERHLQ9NQF3 203 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 KCTD5Q9NXV2 234 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 MALT1Q9UDY8 824 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 SNX6Q9UNH7 406 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 SCN3AQ9NY46 2000 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 OTOL1A6NHN0 477 aaPredicted RBP10.64□□□□□ -0.71
LINC00661-204ENST00000549354 EPOPA6NHQ4 379 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 HEPACAM2A8MVW5 462 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 PRRT4C9JH25 899 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 E7EQ34 232 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 KPNA3O00505 521 aaPredicted RBP10.64□□□□□ -0.71
LINC00661-204ENST00000549354 AP3D1O14617 1153 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 PCDH7O60245 1069 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 PRAMEF4O60810 478 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 EPORP19235 508 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 TOP3AQ13472 1001 aaPredicted RBP10.64□□□□□ -0.71
LINC00661-204ENST00000549354 MAD2L1BPQ15013 274 aaPredicted RBP10.64□□□□□ -0.71
LINC00661-204ENST00000549354 TIGD6Q17RP2 521 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 SYTL3Q4VX76 610 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 HENMT1Q5T8I9 393 aaKnown RBP10.64□□□□□ -0.71
LINC00661-204ENST00000549354 PRAMEF9Q5VWM5 478 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.64□□□□□ -0.71
LINC00661-204ENST00000549354 HSD11B1LQ7Z5J1 315 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 CHPFQ8IZ52 775 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 TRAM1L1Q8N609 369 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 SETD9Q8NE22 299 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 ATL1Q8WXF7 558 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 NXPE3Q969Y0 559 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 CIDECQ96AQ7 238 aaPredicted RBP10.64□□□□□ -0.71
LINC00661-204ENST00000549354 NECTIN4Q96NY8 510 aa10.64□□□□□ -0.71
LINC00661-204ENST00000549354 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.63□□□□□ -0.71
LINC00661-204ENST00000549354 GLOD5A6NK44 160 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 MAGEB17A8MXT2 336 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 H3BM21 787 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 WWP2O00308 870 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 MMP12P39900 470 aa10.63□□□□□ -0.71
LINC00661-204ENST00000549354 SLC6A11P48066 632 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms