RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 GTF2IRD2BQ6EKJ0 949 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 PTCHD4Q6ZW05 846 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 GTF2IRD2Q86UP8 949 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 FAM129BQ96TA1 746 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 DOHHQ9BU89 302 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 SLC6A16Q9GZN6 736 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 TRIT1Q9H3H1 467 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 ACOT13Q9NPJ3 140 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 FAIMQ9NVQ4 179 aa13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 CHCHD3Q9NX63 227 aaKnown RBP13.1□□□□□ -0.31
PRPF40B-209ENST00000548825 TRIM43BA6NCK2 446 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 TTC36A6NLP5 189 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 OLFM2O95897 454 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 PAK4O96013 591 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 NPPBP16860 134 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 ZNF8P17098 575 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 CLCNKAP51800 687 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 NKX2-5P52952 324 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 IFI44LQ53G44 452 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 TMIGD1Q6UXZ0 262 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 CBLL1Q75N03 491 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 SERPINA11Q86U17 422 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 SLC22A16Q86VW1 577 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 GPR65Q8IYL9 337 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 CPXM2Q8N436 756 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 IQCF1Q8N6M8 205 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 WDR36Q8NI36 951 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 WDR20Q8TBZ3 569 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 TRIM43Q96BQ3 446 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 NUS1Q96E22 293 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 NDUFAF4Q9P032 175 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 PCDHGB3Q9Y5G1 929 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 DOCK9Q9BZ29 2069 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 SCN2BO60939 215 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 CXCL10P02778 98 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 CBX3Q13185 183 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 GET4Q7L5D6 327 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 METTL3Q86U44 580 aaKnown RBP13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 FAM124AQ86V42 546 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 RNF168Q8IYW5 571 aaPredicted RBP13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 C7orf57Q8NEG2 295 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 CEP19Q96LK0 163 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 NLNQ9BYT8 704 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 ZBP1Q9H171 429 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 REEP4Q9H6H4 257 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 IL20RAQ9UHF4 553 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 PLXNA3P51805 1871 aa13.09□□□□□ -0.31
PRPF40B-209ENST00000548825 KRBA1A5PL33 1030 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 OTOL1A6NHN0 477 aaPredicted RBP13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 C1orf105O95561 183 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 BMP4P12644 408 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 GPX2P18283 190 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 SEC13P55735 322 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 MPP7Q5T2T1 576 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 HENMT1Q5T8I9 393 aaKnown RBP13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 IRAK1BP1Q5VVH5 260 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 KDM4DQ6B0I6 523 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 FAM83HQ6ZRV2 1179 aaPredicted RBP13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 SLC34A3Q8N130 599 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 TRAM1L1Q8N609 369 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 ADAMTS16Q8TE57 1224 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 TFGQ92734 400 aaPredicted RBP13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 COL21A1Q96P44 957 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 TUBA1CQ9BQE3 449 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 QRSL1Q9H0R6 528 aaKnown RBP13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 RETREG1Q9H6L5 497 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 TMEM9Q9P0T7 183 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 TRPM6Q9BX84 2022 aa13.08□□□□□ -0.31
PRPF40B-209ENST00000548825 SEC16AO15027 2179 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 ABHD14A-ACY1A0A1B0GW23 586 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 GRXCR1A8MXD5 290 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 FRS3O43559 492 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 SLC28A2O43868 658 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 LATS1O95835 1130 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 MPC1LP0DKB6 136 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 ADH5P11766 374 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 ASMTP46597 345 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 SLC35A2P78381 396 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 KCNJ10P78508 379 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 ZNF750Q32MQ0 723 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 ANXA8L1Q5VT79 327 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 ERICH5Q6P6B1 374 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 Q6ZNX1 250 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 SLCO4C1Q6ZQN7 724 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 CCDC103Q8IW40 242 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 CHPFQ8IZ52 775 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 C16orf78Q8WTQ4 265 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 SLC5A11Q8WWX8 675 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 LYSMD1Q96S90 227 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 C17orf62Q9BQA9 187 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 C14orf119Q9NWQ9 140 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 MAN2B2Q9Y2E5 1009 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 GRXCR2A6NFK2 248 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 SLCO2B1O94956 709 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 TMED10P49755 219 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 ALDH6A1Q02252 535 aaKnown RBP13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 TAP2Q03519 686 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 ZNF846Q147U1 533 aa13.08□□□□□ -0.32
PRPF40B-209ENST00000548825 PRAMEF14Q5SWL7 426 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms