RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 OR1F1O43749 312 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 SNX3O60493 162 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 UGDHO60701 494 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 ETHE1O95571 254 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 CTSBP07858 339 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 HNF4AP41235 474 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 VSX2P58304 361 aaPredicted RBP11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 ARF3P61204 181 aaPredicted RBP11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 SSPNQ14714 243 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 NCF4Q15080 339 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 NDUFA9Q16795 377 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 PRTGQ2VWP7 1150 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 TUBB8Q3ZCM7 444 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 SOWAHCQ53LP3 525 aaPredicted RBP11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 FRG2Q64ET8 278 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 MED27Q6P2C8 311 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 EPGNQ6UW88 154 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 TTLL10Q6ZVT0 673 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 OVCH1Q7RTY7 1134 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 PIGWQ7Z7B1 504 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 AFAP1L2Q8N4X5 818 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 OR4K1Q8NGD4 311 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 HUS1BQ8NHY5 278 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 WDR20Q8TBZ3 569 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 BCAS4Q8TDM0 211 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 SELENOMQ8WWX9 145 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 SLC39A7Q92504 469 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 CCT6BQ92526 530 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 RNF31Q96EP0 1072 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 FRG2BQ96QU4 278 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 ACPTQ9BZG2 426 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 SLC26A1Q9H2B4 701 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 EHD1Q9H4M9 534 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 ELOVL6Q9H5J4 265 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 WDR54Q9H977 334 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 DMRT3Q9NQL9 472 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 KLHL14Q9P2G3 628 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 NXT1Q9UKK6 140 aaKnown RBP11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 G3BP2Q9UN86 482 aaKnown RBP11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 SCN3AQ9NY46 2000 aa11.13□□□□□ -0.63
TUBA1C-203ENST00000548470 TRBC2A0A5B9 178 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 MAGEB17A8MXT2 336 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 H0YIV9 168 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 SAP18O00422 153 aaKnown RBP11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 P2RX6O15547 441 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 SNUPNO95149 360 aaKnown RBP11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 TGDSO95455 350 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 CHEK2O96017 543 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 KRT6AP02538 564 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 KRT6BP04259 564 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 SERPIND1P05546 499 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 ITGAXP20702 1163 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 CXCR2P25025 360 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 SCTRP47872 440 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 KRT6CP48668 564 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 ARFIP2P53365 341 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 RPS13P62277 151 aaKnown RBP11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 SNRPNP63162 240 aaKnown RBP11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 IFT88Q13099 833 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 FAM53BQ14153 422 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 ERV3-1Q14264 604 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 LINC00303Q3SY05 128 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 XKR7Q5GH72 579 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 PAGE2BQ5JRK9 111 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 MLIPQ5VWP3 458 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 TMEM198Q66K66 360 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 NXNQ6DKJ4 435 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 FRMPD2BQ6IN97 320 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 NIPAL1Q6NVV3 410 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 MRPL14Q6P1L8 145 aaKnown RBP11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 TMIGD1Q6UXZ0 262 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 RIPOR1Q6ZS17 1223 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 APLFQ8IW19 511 aaPredicted RBP11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 LAS2Q8IYD9 372 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 KRT78Q8N1N4 520 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 CSNK1A1LQ8N752 337 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 ENDOVQ8N8Q3 282 aaKnown RBP11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 CAMKVQ8NCB2 501 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 VPS50Q96JG6 964 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 FAR2Q96K12 515 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 PITHD1Q9GZP4 211 aaPredicted RBP11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 AICDAQ9GZX7 198 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 OR51B5Q9H339 312 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 MEAF6Q9HAF1 191 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 ZNF304Q9HCX3 659 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 PSD3Q9NYI0 1048 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 DHCR7Q9UBM7 475 aaKnown RBP11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 VTI1BQ9UEU0 232 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 SNX6Q9UNH7 406 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 APC2O95996 2303 aa11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 ANKRD11Q6UB99 2663 aaPredicted RBP11.12□□□□□ -0.63
TUBA1C-203ENST00000548470 LOC105369274A0A096LPK9 316 aa11.11□□□□□ -0.63
TUBA1C-203ENST00000548470 A0A0G2JN53 185 aa11.11□□□□□ -0.63
TUBA1C-203ENST00000548470 LOC102723532A0A0G2JNH3 316 aa11.11□□□□□ -0.63
TUBA1C-203ENST00000548470 C4orf51C9J302 202 aa11.11□□□□□ -0.63
TUBA1C-203ENST00000548470 E9PBE3 544 aa11.11□□□□□ -0.63
TUBA1C-203ENST00000548470 PCDH17O14917 1159 aa11.11□□□□□ -0.63
TUBA1C-203ENST00000548470 KLHL41O60662 606 aa11.11□□□□□ -0.63
TUBA1C-203ENST00000548470 ULK1O75385 1050 aa11.11□□□□□ -0.63
TUBA1C-203ENST00000548470 KLF7O75840 302 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms