RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 ZIM2Q9NZV7 527 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 BAIAP2L1Q9UHR4 511 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 A0A0A6YYD5 115 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 TMX2-CTNND1H3BSU7 103 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 PSMD12O00232 456 aaPredicted RBP27.32■■□□□ 1.96
BRF1-213ENST00000548421 ASMTP46597 345 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 MTTPP55157 894 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 NME5P56597 212 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 KLF10Q13118 480 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 DEFB134Q4QY38 66 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 CYB5D1Q6P9G0 228 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 ACOT4Q8N9L9 421 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 C10orf90Q96M02 699 aa27.32■■□□□ 1.96
BRF1-213ENST00000548421 CCT8L1PA6NM43 557 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 AGRPO00253 132 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 TM4SF5O14894 197 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 ANKRD28O15084 1053 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 B3GALT4O96024 378 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 CERS1P27544 350 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 MAPK12P53778 367 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 SNRPNP63162 240 aaKnown RBP27.31■■□□□ 1.96
BRF1-213ENST00000548421 FOXM1Q08050 763 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 PAOXQ6QHF9 649 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 C6orf89Q6UWU4 347 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 DHRS13Q6UX07 377 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 SLCO6A1Q86UG4 719 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 AMER3Q8N944 861 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 CLHC1Q8NHS4 586 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 SERINC2Q96SA4 455 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 STRADBQ9C0K7 418 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 ACTL8Q9H568 366 aa27.31■■□□□ 1.96
BRF1-213ENST00000548421 AKAP7Q9P0M2 348 aaPredicted RBP27.31■■□□□ 1.96
BRF1-213ENST00000548421 EFCAB7A8K855 629 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 EBAG9O00559 213 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 SLC22A3O75751 556 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 KLHL18O94889 574 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 DKK1O94907 266 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 IL1RNP18510 177 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 JAK1P23458 1154 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 GSTM5P46439 218 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 CLDN8P56748 225 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 UFM1P61960 85 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 FAM53BQ14153 422 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 MUM1Q2TAK8 710 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 FAM214AQ32MH5 1076 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 CDC26Q8NHZ8 85 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 C16orf78Q8WTQ4 265 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 DPY30Q9C005 99 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 ANKHQ9HCJ1 492 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 TMEM45AQ9NWC5 275 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 OCIAD1Q9NX40 245 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 RARRES3Q9UL19 164 aa27.3■■□□□ 1.96
BRF1-213ENST00000548421 SPAARA0A1B0GVQ0 90 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 CAPN14A8MX76 684 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 TMPRSS11DO60235 418 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 GALR3O60755 368 aaPredicted RBP27.29■■□□□ 1.96
BRF1-213ENST00000548421 MT-CO3P00414 261 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 FTH1P19P0C7X4 201 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 PIK3R1P27986 724 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 TRA2BP62995 288 aaKnown RBP27.29■■□□□ 1.96
BRF1-213ENST00000548421 SKP1P63208 163 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 SLC9A5Q14940 896 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 ISXQ2M1V0 245 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 AGKQ53H12 422 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 NIPAL1Q6NVV3 410 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 OR9I1Q8NGQ6 314 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 PROKR1Q8TCW9 393 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 EGLN2Q96KS0 407 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 CMKLR1Q99788 373 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 MYNNQ9NPC7 610 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 CCDC167Q9P0B6 97 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 WBP11Q9Y2W2 641 aaKnown RBP27.29■■□□□ 1.96
BRF1-213ENST00000548421 NAALAD2Q9Y3Q0 740 aa27.29■■□□□ 1.96
BRF1-213ENST00000548421 B3GALT2O43825 422 aa27.28■■□□□ 1.96
BRF1-213ENST00000548421 TAS2R50P59544 299 aa27.28■■□□□ 1.96
BRF1-213ENST00000548421 SLAMF1Q13291 335 aa27.28■■□□□ 1.96
BRF1-213ENST00000548421 YOD1Q5VVQ6 348 aaPredicted RBP27.28■■□□□ 1.96
BRF1-213ENST00000548421 IKBIPQ70UQ0 350 aa27.28■■□□□ 1.96
BRF1-213ENST00000548421 PRSS41Q7RTY9 318 aa27.28■■□□□ 1.96
BRF1-213ENST00000548421 BPHLQ86WA6 291 aaPredicted RBP27.28■■□□□ 1.96
BRF1-213ENST00000548421 PDSS2Q86YH6 399 aa27.28■■□□□ 1.96
BRF1-213ENST00000548421 TREML1Q86YW5 311 aa27.28■■□□□ 1.96
BRF1-213ENST00000548421 PUM2Q8TB72 1066 aaKnown RBP eCLIP27.28■■□□□ 1.96
BRF1-213ENST00000548421 TEX37Q96LM6 180 aa27.28■■□□□ 1.96
BRF1-213ENST00000548421 DEPDC7Q96QD5 511 aa27.28■■□□□ 1.96
BRF1-213ENST00000548421 CUTCQ9NTM9 273 aa27.28■■□□□ 1.96
BRF1-213ENST00000548421 SLC30A4O14863 429 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 HYAL3O43820 417 aaPredicted RBP27.27■■□□□ 1.96
BRF1-213ENST00000548421 PRMT3O60678 531 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 MED26O95402 600 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 FAM58BPP0C7Q3 252 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 CEACAM1P13688 526 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 GCGRP47871 477 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 SIM1P81133 766 aaPredicted RBP27.27■■□□□ 1.96
BRF1-213ENST00000548421 HES3Q5TGS1 186 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 MRM1Q6IN84 353 aaKnown RBP27.27■■□□□ 1.96
BRF1-213ENST00000548421 RIPOR1Q6ZS17 1223 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 TMEM132CQ8N3T6 1108 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 BMPERQ8N8U9 685 aa27.27■■□□□ 1.96
BRF1-213ENST00000548421 SLC45A3Q96JT2 553 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms