RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 ACRBPQ8NEB7 543 aa15.76■□□□□ 0.11
VPS29-204ENST00000548259 ABHD11Q8NFV4 315 aa15.76■□□□□ 0.11
VPS29-204ENST00000548259 GIMAP7Q8NHV1 300 aa15.76■□□□□ 0.11
VPS29-204ENST00000548259 ASB15Q8WXK1 588 aa15.76■□□□□ 0.11
VPS29-204ENST00000548259 GPR21Q99679 349 aa15.76■□□□□ 0.11
VPS29-204ENST00000548259 SGPP1Q9BX95 441 aa15.76■□□□□ 0.11
VPS29-204ENST00000548259 ATG10Q9H0Y0 220 aa15.76■□□□□ 0.11
VPS29-204ENST00000548259 GSX1Q9H4S2 264 aaPredicted RBP15.76■□□□□ 0.11
VPS29-204ENST00000548259 ZDHHC11Q9H8X9 412 aa15.76■□□□□ 0.11
VPS29-204ENST00000548259 TRMT6Q9UJA5 497 aaKnown RBP15.76■□□□□ 0.11
VPS29-204ENST00000548259 ACAD8Q9UKU7 415 aa15.76■□□□□ 0.11
VPS29-204ENST00000548259 PLEKHA6Q9Y2H5 1048 aa15.76■□□□□ 0.11
VPS29-204ENST00000548259 MMACHCQ9Y4U1 282 aa15.76■□□□□ 0.11
VPS29-204ENST00000548259 FAM166BA8MTA8 275 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 PROM1O43490 865 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 ZNF888P0CJ79 500 aaPredicted RBP15.75■□□□□ 0.11
VPS29-204ENST00000548259 GLI4P10075 376 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 TPSB2P20231 275 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 LTBQ06643 244 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 TPSAB1Q15661 275 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 CCNG2Q16589 344 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 BBS9Q3SYG4 887 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 WLSQ5T9L3 541 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 WDR53Q7Z5U6 358 aaPredicted RBP15.75■□□□□ 0.11
VPS29-204ENST00000548259 MYO1HQ8N1T3 1032 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 APCDD1LQ8NCL9 501 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 TRPV3Q8NET8 790 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 OR2M7Q8NG81 312 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 NT5CQ8TCD5 201 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 CD200R1Q8TD46 325 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 CALML6Q8TD86 181 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 SARAFQ96BY9 339 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 MBD6Q96DN6 1003 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 TRIM54Q9BYV2 358 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 RHBGQ9H310 441 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 DLL4Q9NR61 685 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 FBXO6Q9NRD1 293 aaPredicted RBP15.75■□□□□ 0.11
VPS29-204ENST00000548259 ZNF358Q9NW07 568 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 ZFATQ9P243 1243 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 ZFP69BQ9UJL9 534 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 RPH3AQ9Y2J0 694 aaPredicted RBP15.75■□□□□ 0.11
VPS29-204ENST00000548259 REXO2Q9Y3B8 237 aaKnown RBP15.75■□□□□ 0.11
VPS29-204ENST00000548259 MAD1L1Q9Y6D9 718 aa15.75■□□□□ 0.11
VPS29-204ENST00000548259 IGKV3D-11A0A0A0MRZ8 115 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 CLDN4O14493 209 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 SLC16A5O15375 505 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 GABRA1P14867 456 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 NPPBP16860 134 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 AHRP35869 848 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 ADAM8P78325 824 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 HYAL2Q12891 473 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 CSHL1Q14406 222 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 FAM109AQ8N4B1 249 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 GABPB2Q8TAK5 448 aaPredicted RBP15.74■□□□□ 0.11
VPS29-204ENST00000548259 SNF8Q96H20 258 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 PWWP2AQ96N64 755 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 FAM173AQ9BQD7 235 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 LDAHQ9H6V9 325 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 EXO5Q9H790 373 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 PNO1Q9NRX1 252 aaKnown RBP15.74■□□□□ 0.11
VPS29-204ENST00000548259 SH2B3Q9UQQ2 575 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 PDE10AQ9Y233 779 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 FBN3Q75N90 2809 aa15.74■□□□□ 0.11
VPS29-204ENST00000548259 A0A0G2JNJ9 132 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 FAM171A2A8MVW0 826 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 AQP7O14520 342 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 SUSD5O60279 629 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 IGHG3P01860 377 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 ADSLP30566 484 aaPredicted RBP15.73■□□□□ 0.11
VPS29-204ENST00000548259 UQCRC1P31930 480 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 MAN2A2P49641 1150 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 DLX5P56178 289 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 CTBP1Q13363 440 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 KEAP1Q14145 624 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 SKOR2Q2VWA4 1001 aaPredicted RBP15.73■□□□□ 0.11
VPS29-204ENST00000548259 DUPD1Q68J44 220 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 DRICH1Q6PGQ1 229 aaPredicted RBP15.73■□□□□ 0.11
VPS29-204ENST00000548259 IL20RBQ6UXL0 311 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 OR4K1Q8NGD4 311 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 UTP15Q8TED0 518 aaKnown RBP15.73■□□□□ 0.11
VPS29-204ENST00000548259 FAM222BQ8WU58 562 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 MAIP1Q8WWC4 291 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 ATL1Q8WXF7 558 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 ZNF669Q96BR6 464 aaPredicted RBP15.73■□□□□ 0.11
VPS29-204ENST00000548259 TTTY12Q9BZ98 90 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 LIME1Q9H400 295 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 IL1RL2Q9HB29 575 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 NECTIN3Q9NQS3 549 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 ALKBH4Q9NXW9 302 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 Q9UFV3 132 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 MRPS33Q9Y291 106 aaKnown RBP15.73■□□□□ 0.11
VPS29-204ENST00000548259 ZKSCAN5Q9Y2L8 839 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 MED16Q9Y2X0 877 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 HCFC1P51610 2035 aa15.73■□□□□ 0.11
VPS29-204ENST00000548259 A0A1B0GVC2 190 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 A6NNC1 897 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 HSPB2A8KAH6 182 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 OR2J2O76002 312 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 RAF1P04049 648 aa15.72■□□□□ 0.11
VPS29-204ENST00000548259 CNR1P21554 472 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms