RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 RPS27LQ71UM5 84 aaKnown RBP17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 UBE3DQ7Z6J8 389 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 ZNF605Q86T29 641 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 PLPP5Q8NEB5 264 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 OR52B6Q8NGF0 335 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 HUS1BQ8NHY5 278 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 ATP6V1E2Q96A05 226 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 CDK15Q96Q40 435 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 ZNF700Q9H0M5 742 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 ZNF552Q9H707 407 aaPredicted RBP17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 ADGRE2Q9UHX3 823 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 TSC22D4Q9Y3Q8 395 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 ZNF451Q9Y4E5 1061 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 PCDHGB7Q9Y5F8 929 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 PCDHGA11Q9Y5H2 935 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 ZNF462Q96JM2 2506 aa17.65■□□□□ 0.42
PRPF40B-206ENST00000547764 A0A088AWK7 358 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 TLDC2A0PJX2 215 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 H0YIV9 168 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 SUV39H1O43463 412 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 DLX3O60479 287 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 B4GALT2O60909 372 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 SH3BGRLO75368 114 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 CLDN9O95484 217 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 TGFB1P01137 390 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 RNH1P13489 461 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 ZNF10P21506 573 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 JAK1P23458 1154 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 ARL1P40616 181 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 CCNG1P51959 295 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 TGM3Q08188 693 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 KLRB1Q12918 225 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 DDX39BQ13838 428 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 PCOLCEQ15113 449 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 VWA5B1Q5TIE3 1220 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 ANKRD37Q7Z713 158 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 RNF175Q8N4F7 328 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 ZNF483Q8TF39 744 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 CMTM7Q96FZ5 175 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 THOC3Q96J01 351 aaKnown RBP17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 NTMT1Q9BV86 223 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 NPLQ9BXD5 320 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 C1QTNF3Q9BXJ4 246 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 SEMA4BQ9NPR2 832 aaPredicted RBP17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 PRDM7Q9NQW5 492 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 SCN2AQ99250 2005 aa17.64■□□□□ 0.41
PRPF40B-206ENST00000547764 DOCK10Q96BY6 2186 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 IGHV3-20A0A0C4DH32 117 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 MAGEB17A8MXT2 336 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 FAM227AF5H4B4 570 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 PSMD12O00232 456 aaPredicted RBP17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 B3GALT2O43825 422 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 GLRA3O75311 464 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 ATP5F1P24539 256 aaPredicted RBP17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 PIK3CBP42338 1070 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 MTTPP55157 894 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 CDH13P55290 713 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 HERVK_113P63132 956 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 TRAF3Q13114 568 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 ABRAXAS2Q15018 415 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 ZRSR2Q15696 482 aaKnown RBP17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 NSDHLQ15738 373 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 TMEM35AQ53FP2 167 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 COLEC12Q5KU26 742 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 CHSY3Q70JA7 882 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 PRICKLE2Q7Z3G6 844 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 CPEB2Q7Z5Q1 589 aaKnown RBP17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 TEX19Q8NA77 164 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 SRFBP1Q8NEF9 429 aaKnown RBP17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 TSLPQ969D9 159 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 REPS1Q96D71 796 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 KCNC2Q96PR1 638 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 SERINC2Q96SA4 455 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 MTERF1Q99551 399 aaKnown RBP17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 ERVK-6Q9BXR3 956 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 LHPPQ9H008 270 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 OR51B5Q9H339 312 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 DMRT3Q9NQL9 472 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 RIC8BQ9NVN3 520 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 C5AR2Q9P296 337 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 C19orf25Q9UFG5 118 aaPredicted RBP17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 ANAPC2Q9UJX6 822 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 RAB21Q9UL25 225 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 EMCNQ9ULC0 261 aa17.63■□□□□ 0.41
PRPF40B-206ENST00000547764 SAP18O00422 153 aaKnown RBP17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 PPP6CO00743 305 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 KLHL41O60662 606 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 ALPPP05187 535 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 CERS1P27544 350 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 NEK2P51955 445 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 BTG2P78543 158 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 IFFO1Q0D2I5 559 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 UNC50Q53HI1 259 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 DEPDC1Q5TB30 811 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 IRAK1BP1Q5VVH5 260 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 KHDRBS2Q5VWX1 349 aaKnown RBP17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 ZNF793Q6ZN11 406 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 KBTBD2Q8IY47 623 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 AMER2Q8N7J2 671 aa17.62■□□□□ 0.41
PRPF40B-206ENST00000547764 WDR20Q8TBZ3 569 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms