RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 TTC9Q92623 222 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 RGMAQ96B86 450 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 VPS50Q96JG6 964 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 F2RL3Q96RI0 385 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 SERINC2Q96SA4 455 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 MTERF1Q99551 399 aaKnown RBP13.68□□□□□ -0.22
DDX54-203ENST00000546869 SERPINI1Q99574 410 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 CENPKQ9BS16 269 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 CENPHQ9H3R5 247 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 BRF2Q9HAW0 419 aa13.68□□□□□ -0.22
DDX54-203ENST00000546869 DSPP15924 2871 aaKnown RBP13.68□□□□□ -0.22
DDX54-203ENST00000546869 IDSB3KWA1 339 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 AGPSO00116 658 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 BIRC5O15392 142 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 B3GALT2O43825 422 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 NPHS1O60500 1241 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 OR4F21O95013 312 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 SEMA3DO95025 777 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 ZWINTO95229 277 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 KRT6AP02538 564 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 KRT6BP04259 564 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 DHRS4L1P0CG22 281 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 HSD3B1P14060 373 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 TSPAN8P19075 237 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 HSD3B2P26439 372 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 ALDH3A1P30838 453 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 ARL1P40616 181 aaPredicted RBP13.67□□□□□ -0.22
DDX54-203ENST00000546869 KRT6CP48668 564 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 NEK2P51955 445 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 PLA2G16P53816 162 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 RPS13P62277 151 aaKnown RBP13.67□□□□□ -0.22
DDX54-203ENST00000546869 MAT1AQ00266 395 aaKnown RBP13.67□□□□□ -0.22
DDX54-203ENST00000546869 COL9A2Q14055 689 aaPredicted RBP13.67□□□□□ -0.22
DDX54-203ENST00000546869 TBR1Q16650 682 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 SYT16Q17RD7 645 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 AP5B1Q2VPB7 878 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 TUBB8Q3ZCM7 444 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 CFAP157Q5JU67 520 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 FAM69BQ5VUD6 431 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 TTC19Q6DKK2 380 aaPredicted RBP13.67□□□□□ -0.22
DDX54-203ENST00000546869 BORAQ6PGQ7 559 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 TMEM205Q6UW68 189 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 PPP1R32Q7Z5V6 425 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 LAPTM4BQ86VI4 370 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 TMEM102Q8N9M5 508 aaPredicted RBP13.67□□□□□ -0.22
DDX54-203ENST00000546869 PLPP5Q8NEB5 264 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 OR5T3Q8NGG3 340 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 AGAP11Q8TF27 550 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 APOBEC4Q8WW27 367 aaKnown RBP13.67□□□□□ -0.22
DDX54-203ENST00000546869 SREK1Q8WXA9 508 aaKnown RBP13.67□□□□□ -0.22
DDX54-203ENST00000546869 TBC1D20Q96BZ9 403 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 TLCD1Q96CP7 247 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 YIPF2Q9BWQ6 316 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 GATA5Q9BWX5 397 aaPredicted RBP13.67□□□□□ -0.22
DDX54-203ENST00000546869 ELOVL6Q9H5J4 265 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 SOX17Q9H6I2 414 aaPredicted RBP13.67□□□□□ -0.22
DDX54-203ENST00000546869 C3orf18Q9UK00 162 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 LHX6Q9UPM6 363 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 KCNMB2Q9Y691 235 aa13.67□□□□□ -0.22
DDX54-203ENST00000546869 LOC102723996A0A087X1L8 192 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 SOCS6O14544 535 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 UBFD1O14562 309 aaKnown RBP13.66□□□□□ -0.22
DDX54-203ENST00000546869 DNAJB6O75190 326 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 ULK1O75385 1050 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 BPGMP07738 259 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 FHP07954 510 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 PRKAR1AP10644 381 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 RNH1P13489 461 aaKnown RBP13.66□□□□□ -0.22
DDX54-203ENST00000546869 HIST1H1TP22492 207 aaPredicted RBP13.66□□□□□ -0.22
DDX54-203ENST00000546869 JAK1P23458 1154 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 ATP5A1P25705 553 aaKnown RBP13.66□□□□□ -0.22
DDX54-203ENST00000546869 EMP2P54851 167 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 RRADP55042 308 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 SOX8P57073 446 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 RUNX2Q13950 521 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 RCN2Q14257 317 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 ATP1A1-AS1Q5TC04 95 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 AGBL2Q5U5Z8 902 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 OR4C11Q6IEV9 310 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 MRGPREQ86SM8 312 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 CA13Q8N1Q1 262 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 ZCCHC7Q8N3Z6 543 aaKnown RBP13.66□□□□□ -0.22
DDX54-203ENST00000546869 GBP7Q8N8V2 638 aaPredicted RBP13.66□□□□□ -0.22
DDX54-203ENST00000546869 METTL6Q8TCB7 284 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 CRB3Q9BUF7 120 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 OR51B5Q9H339 312 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 DDX31Q9H8H2 851 aaKnown RBP13.66□□□□□ -0.22
DDX54-203ENST00000546869 LYRM4Q9HD34 91 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 MID1IP1Q9NPA3 183 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 LANCL2Q9NS86 450 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 NMRK1Q9NWW6 199 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 AHSPQ9NZD4 102 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 HCN3Q9P1Z3 774 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 DAPP1Q9UN19 280 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 HS3ST3B1Q9Y662 390 aa13.66□□□□□ -0.22
DDX54-203ENST00000546869 BLACEA4D250 179 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 MANBAO00462 879 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 PEX12O00623 359 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 PLPP1O14494 284 aa13.65□□□□□ -0.22
DDX54-203ENST00000546869 FFAR3O14843 346 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms