RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 EQTNQ9NQ60 294 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 MAT2BQ9NZL9 334 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 NLKQ9UBE8 527 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 PRKAG2Q9UGJ0 569 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 METTL15A6NJ78 407 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 GABRR3A8MPY1 467 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 FAM25AB3EWG3 89 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 FAM25CB3EWG5 89 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 FAM25GB3EWG6 89 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 ARHGAP33O14559 1287 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 PRAMEF4O60810 478 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 ENTPD6O75354 484 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 GADD45GO95257 159 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 ATF6P18850 670 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 C2orf80Q0P641 193 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 MTA1Q13330 715 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 DOC2AQ14183 400 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 COQ5Q5HYK3 327 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 PRAMEF9Q5VWM5 478 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 IL20RBQ6UXL0 311 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 USP30Q70CQ3 517 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 KRT74Q7RTS7 529 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 PRSS48Q7RTY5 328 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 CHPFQ8IZ52 775 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 HJURPQ8NCD3 748 aaPredicted RBP14.08□□□□□ -0.16
HOXC11-202ENST00000546378 C1orf74Q96LT6 269 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 SLC35A5Q9BS91 424 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 TMED9Q9BVK6 235 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 HDHD2Q9H0R4 259 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 DUSP21Q9H596 190 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 TRPM5Q9NZQ8 1165 aa14.08□□□□□ -0.16
HOXC11-202ENST00000546378 FABP12A6NFH5 140 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 KLK1P06870 262 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 ADRA2AP08913 450 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 HOXC13P31276 330 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 MNX1P50219 401 aaPredicted RBP14.07□□□□□ -0.16
HOXC11-202ENST00000546378 DOC2BQ14184 412 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 VEPH1Q14D04 833 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 AFMIDQ63HM1 303 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 Q6ZVU0 165 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 XAGE5Q8WWM1 108 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 GATAD2BQ8WXI9 593 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 PIGKQ92643 395 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 WACQ9BTA9 647 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 MAGEH1Q9H213 219 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 KCNH6Q9H252 994 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 SP140LQ9H930 580 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 MIEF1Q9NQG6 463 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 BCHEP06276 602 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 SMSP52788 366 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 TARDBPQ13148 414 aaKnown RBP eCLIP14.07□□□□□ -0.16
HOXC11-202ENST00000546378 IL18Q14116 193 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 PTGES3Q15185 160 aaKnown RBP14.07□□□□□ -0.16
HOXC11-202ENST00000546378 ZMYND11Q15326 602 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 DUOXA1Q1HG43 343 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 ZXDCQ2QGD7 858 aaPredicted RBP14.07□□□□□ -0.16
HOXC11-202ENST00000546378 SYT6Q5T7P8 510 aaPredicted RBP14.07□□□□□ -0.16
HOXC11-202ENST00000546378 FBXO46Q6PJ61 603 aaPredicted RBP14.07□□□□□ -0.16
HOXC11-202ENST00000546378 TRMT11Q7Z4G4 463 aaKnown RBP14.07□□□□□ -0.16
HOXC11-202ENST00000546378 VPS37AQ8NEZ2 397 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 TRIM43Q96BQ3 446 aaPredicted RBP14.07□□□□□ -0.16
HOXC11-202ENST00000546378 HDHD5Q9BXW7 423 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 SLC32A1Q9H598 525 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 SAGE2PA6NJ88 616 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 ARNTLO00327 626 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 PLK4O00444 970 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 MYL12BO14950 172 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 SYN3O14994 580 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 STC2O76061 302 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 HPRP00739 348 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 CBLP22681 906 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 ZNF284Q2VY69 593 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 KDM4DQ6B0I6 523 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 CXorf57Q6NSI4 855 aaKnown RBP14.07□□□□□ -0.16
HOXC11-202ENST00000546378 TSPYL5Q86VY4 417 aaPredicted RBP14.07□□□□□ -0.16
HOXC11-202ENST00000546378 ZZZ3Q8IYH5 903 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 ZNF557Q8N988 423 aaPredicted RBP14.07□□□□□ -0.16
HOXC11-202ENST00000546378 GPR150Q8NGU9 434 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 EXOSC8Q96B26 276 aaKnown RBP14.07□□□□□ -0.16
HOXC11-202ENST00000546378 CCDC120Q96HB5 630 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 CTRCQ99895 268 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 MMP27Q9H306 513 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 ANKRA2Q9H9E1 313 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 B3GNT3Q9Y2A9 372 aa14.07□□□□□ -0.16
HOXC11-202ENST00000546378 SCN2AQ99250 2005 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 TRAV6A0A075B6T7 132 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 C2orf92A0A1B0GVN3 265 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 CLCA1A8K7I4 914 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 A8MUA0 341 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 GPX5O75715 221 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 SERPINI2O75830 405 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 EN2P19622 333 aaPredicted RBP14.06□□□□□ -0.16
HOXC11-202ENST00000546378 GABARAPL2P60520 117 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 LRRC32Q14392 662 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 CRTC2Q53ET0 693 aaPredicted RBP14.06□□□□□ -0.16
HOXC11-202ENST00000546378 ANKRD33Q7Z3H0 272 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 ZSWIM9Q86XI8 627 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 TEX26Q8N6G2 289 aa14.06□□□□□ -0.16
HOXC11-202ENST00000546378 QRSL1Q9H0R6 528 aaKnown RBP14.06□□□□□ -0.16
HOXC11-202ENST00000546378 KCNK12Q9HB15 430 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms