RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 SCML2Q9UQR0 700 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 Q9Y3F1 56 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 NEUROG3Q9Y4Z2 214 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 A3GALT2U3KPV4 340 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 hCG_1807616A0A1W2PRN6 198 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 STX16O14662 325 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 PCDH17O14917 1159 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 INPPL1O15357 1258 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 KLK8O60259 260 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 PLOD3O60568 738 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 ECI2O75521 394 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 KDM4BO94953 1096 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 PRSS23O95084 383 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 RAP2AP10114 183 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 ACVRL1P37023 503 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 AGTR2P50052 363 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 HNMTP50135 292 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 UFM1P61960 85 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 DEFA5Q01523 94 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 CACNB2Q08289 660 aaPredicted RBP7.58□□□□□ -1.2
UBR1-202ENST00000546274 CRHR2Q13324 411 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 SLC39A12Q504Y0 691 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 SLC35F1Q5T1Q4 408 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 ZNF648Q5T619 568 aaPredicted RBP7.58□□□□□ -1.2
UBR1-202ENST00000546274 PAQR3Q6TCH7 311 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 ADGRD2Q7Z7M1 963 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 TMEM179BQ7Z7N9 219 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 STX12Q86Y82 276 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 KCT2Q8NC54 265 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 FUBP1Q96AE4 644 aaKnown RBP7.58□□□□□ -1.2
UBR1-202ENST00000546274 ZNF599Q96NL3 588 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 SEMA3CQ99985 751 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 C1QTNF3Q9BXJ4 246 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 SLC22A11Q9NSA0 550 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 ZNF275Q9NSD4 429 aaPredicted RBP7.58□□□□□ -1.2
UBR1-202ENST00000546274 CPA4Q9UI42 421 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 M0QZ92 97 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 CBX4O00257 560 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 CDC7O00311 574 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 PSIP1O75475 530 aaKnown RBP7.58□□□□□ -1.2
UBR1-202ENST00000546274 APOL3O95236 402 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 TSPAN12O95859 305 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 TBX18O95935 607 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 C1RP00736 705 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 TSPAN19P0C672 248 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 PFKLP17858 780 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 HK1P19367 917 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 OGNP20774 298 aaKnown RBP7.58□□□□□ -1.2
UBR1-202ENST00000546274 ACADLP28330 430 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 CD52P31358 61 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 ZNF140P52738 457 aaPredicted RBP7.58□□□□□ -1.2
UBR1-202ENST00000546274 TBX4P57082 545 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 SP3Q02447 781 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 MXD1Q05195 221 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 IL10RBQ08334 325 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 TUSC3Q13454 348 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 TSNQ15631 228 aaKnown RBP7.58□□□□□ -1.2
UBR1-202ENST00000546274 SMAD2Q15796 467 aaKnown RBP7.58□□□□□ -1.2
UBR1-202ENST00000546274 SAXO2Q658L1 398 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 ENPP6Q6UWR7 440 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 SERINC5Q86VE9 423 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 RIMKLAQ8IXN7 391 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 OR4L1Q8NH43 312 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 C2CD4CQ8TF44 421 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 TSPEARQ8WU66 669 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 TRIM43Q96BQ3 446 aaPredicted RBP7.58□□□□□ -1.2
UBR1-202ENST00000546274 ELP4Q96EB1 424 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 RPRD1AQ96P16 312 aaPredicted RBP7.58□□□□□ -1.2
UBR1-202ENST00000546274 APOL5Q9BWW9 433 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 GSX2Q9BZM3 304 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 DERL2Q9GZP9 239 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 AP5M1Q9H0R1 490 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 RERGLQ9H628 205 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 KIF17Q9P2E2 1029 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 CTSFQ9UBX1 484 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 MALT1Q9UDY8 824 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 LIMD1Q9UGP4 676 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 PCTPQ9UKL6 214 aa7.58□□□□□ -1.2
UBR1-202ENST00000546274 PPIEQ9UNP9 301 aaKnown RBP7.58□□□□□ -1.2
UBR1-202ENST00000546274 SMIM30A4D0T7 59 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 DRGXA6NNA5 263 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 MPC2O95563 127 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 TPOP07202 933 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 APEHP13798 732 aaKnown RBP7.57□□□□□ -1.2
UBR1-202ENST00000546274 EPHA2P29317 976 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 GRK4P32298 578 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 HK3P52790 923 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 CREMQ03060 361 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 MRNIPQ6NTE8 343 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 GALNT10Q86SR1 603 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 MON1AQ86VX9 555 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 CYP4Z1Q86W10 505 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 SCN4BQ8IWT1 228 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 CDYL2Q8N8U2 506 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 OR11H4Q8NGC9 324 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 PROKR1Q8TCW9 393 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 RBP7Q96R05 134 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 PELOQ9BRX2 385 aaKnown RBP7.57□□□□□ -1.2
UBR1-202ENST00000546274 CNPPD1Q9BV87 410 aa7.57□□□□□ -1.2
UBR1-202ENST00000546274 SRRQ9GZT4 340 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms