RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 GOLGA6L1Q8N7Z2 621 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 ANKRD42Q8N9B4 389 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 ZSCAN1Q8NBB4 408 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 SRFBP1Q8NEF9 429 aaKnown RBP19.38■□□□□ 0.69
HMGA2-211ENST00000545998 OR5T3Q8NGG3 340 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 OR2Y1Q8NGV0 311 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 STT3BQ8TCJ2 826 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 SNRNP27Q8WVK2 155 aaKnown RBP19.38■□□□□ 0.69
HMGA2-211ENST00000545998 FAR2Q96K12 515 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 KCNC2Q96PR1 638 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 KCNA7Q96RP8 456 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 YIPF2Q9BWQ6 316 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 TGIF2Q9GZN2 237 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 MLXIPLQ9NP71 852 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 TNFRSF12AQ9NP84 129 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 HCN3Q9P1Z3 774 aa19.38■□□□□ 0.69
HMGA2-211ENST00000545998 NXT1Q9UKK6 140 aaKnown RBP19.38■□□□□ 0.69
HMGA2-211ENST00000545998 PTRH2Q9Y3E5 179 aaKnown RBP19.38■□□□□ 0.69
HMGA2-211ENST00000545998 WDR91A4D1P6 747 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 MANBAO00462 879 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 DNAJB6O75190 326 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 ZGLP1P0C6A0 271 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 SERPINB5P36952 375 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 FOXA1P55317 472 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 WDR4P57081 412 aaKnown RBP19.37■□□□□ 0.69
HMGA2-211ENST00000545998 OCA2Q04671 838 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 TGM3Q08188 693 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 CUL3Q13618 768 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 IL10RAQ13651 578 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 RCN2Q14257 317 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 CRTC2Q53ET0 693 aaPredicted RBP19.37■□□□□ 0.69
HMGA2-211ENST00000545998 SGO1Q5FBB7 561 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 VWA2Q5GFL6 755 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 TMEM151BQ8IW70 566 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 OR51Q1Q8NH59 317 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 SELENOMQ8WWX9 145 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 MIEF2Q96C03 454 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 SHCBP1LQ9BZQ2 653 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 CLK4Q9HAZ1 481 aaKnown RBP19.37■□□□□ 0.69
HMGA2-211ENST00000545998 PRDM7Q9NQW5 492 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 NUP210LQ5VU65 1888 aa19.37■□□□□ 0.69
HMGA2-211ENST00000545998 A0A088AWK7 358 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 SAP18O00422 153 aaKnown RBP19.36■□□□□ 0.69
HMGA2-211ENST00000545998 NKX2-8O15522 239 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 KRT6AP02538 564 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 KRT6BP04259 564 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 UMODP07911 640 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 ZNF10P21506 573 aaPredicted RBP19.36■□□□□ 0.69
HMGA2-211ENST00000545998 HMOX2P30519 316 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 FOLR3P41439 243 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 KRT6CP48668 564 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 OLR1P78380 273 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 MC1RQ01726 317 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 GALNT1Q10472 559 aaPredicted RBP19.36■□□□□ 0.69
HMGA2-211ENST00000545998 CES4AQ5XG92 561 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 ZC3H7AQ8IWR0 971 aaKnown RBP19.36■□□□□ 0.69
HMGA2-211ENST00000545998 TBCDQ9BTW9 1192 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 SOX17Q9H6I2 414 aaPredicted RBP19.36■□□□□ 0.69
HMGA2-211ENST00000545998 BRF2Q9HAW0 419 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 C14orf105Q9NVL8 296 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 TIMM22Q9Y584 194 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 CACNA1BQ00975 2339 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 CACNA1GO43497 2377 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 HMGB1P1B2RPK0 211 aaPredicted RBP19.36■□□□□ 0.69
HMGA2-211ENST00000545998 PLPP1O14494 284 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 BMP10O95393 424 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 CHRNGP07510 517 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 ARRB2P32121 409 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 ARFIP1P53367 373 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 CXADRP78310 365 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 CHI3L2Q15782 390 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 UGT8Q16880 541 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 ARL13AQ5H913 290 aaPredicted RBP19.36■□□□□ 0.69
HMGA2-211ENST00000545998 HHATQ5VTY9 493 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 ZNF793Q6ZN11 406 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 ATG14Q6ZNE5 492 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 SHISA6Q6ZSJ9 500 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 CUZD1Q86UP6 607 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 RGMAQ96B86 450 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 CRELD1Q96HD1 420 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 SERPINI1Q99574 410 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 CENPKQ9BS16 269 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 NKIRAS1Q9NYS0 192 aa19.36■□□□□ 0.69
HMGA2-211ENST00000545998 RTCAO00442 366 aaKnown RBP19.35■□□□□ 0.69
HMGA2-211ENST00000545998 CHST10O43529 356 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 ULK1O75385 1050 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 SCELO95171 688 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 FURINP09958 794 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 XCR1P46094 333 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 HTR6P50406 440 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 MTTPP55157 894 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 KLC1Q07866 573 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 ERV3-1Q14264 604 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 ATP1A1-AS1Q5TC04 95 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 C19orf48Q6RUI8 117 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 LAPTM4BQ86VI4 370 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 CA13Q8N1Q1 262 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 MGARPQ8TDB4 240 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 ADAMTS17Q8TE56 1095 aa19.35■□□□□ 0.69
HMGA2-211ENST00000545998 SERINC2Q96SA4 455 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms