RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ZNF225Q9UK10 706 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 CDH10Q9Y6N8 788 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 FAM159BA6NKW6 160 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 COQ9O75208 318 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 GPX6P59796 221 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 PTGR1Q14914 329 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.94□□□□□ -0.021e-7■■■□□ 16.6
CHD4-210ENST00000544040 SLC10A6Q3KNW5 377 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 DEFB119Q8N690 84 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 RBCK1Q9BYM8 510 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 Q9N2J8 555 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 TMEM184CQ9NVA4 438 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 GP1BBP13224 206 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 HSD17B2P37059 387 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 NKX2-5P52952 324 aaPredicted RBP14.93□□□□□ -0.02
CHD4-210ENST00000544040 CDNFQ49AH0 187 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 Q8N9G6 341 aaPredicted RBP14.93□□□□□ -0.02
CHD4-210ENST00000544040 SUN3Q8TAQ9 357 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 PAQR5Q9NXK6 330 aaPredicted RBP14.93□□□□□ -0.02
CHD4-210ENST00000544040 CAPN5O15484 640 aaPredicted RBP14.93□□□□□ -0.02
CHD4-210ENST00000544040 ANXA3P12429 323 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 SLC6A6P31641 620 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 LUMP51884 338 aaPredicted RBP14.93□□□□□ -0.02
CHD4-210ENST00000544040 DECR1Q16698 335 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 CARD17Q5XLA6 110 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 CYP4V2Q6ZWL3 525 aaPredicted RBP14.93□□□□□ -0.02
CHD4-210ENST00000544040 ELMOD2Q8IZ81 293 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 BTBD1Q9H0C5 482 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 EXOSC1Q9Y3B2 195 aaKnown RBP14.93□□□□□ -0.02
CHD4-210ENST00000544040 IL7P13232 177 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 MSS51Q4VC12 460 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 CLEC20AQ6ZU45 233 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 TICAM1Q8IUC6 712 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 NPAS3Q8IXF0 933 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 MUS81Q96NY9 551 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 C7orf50Q9BRJ6 194 aaKnown RBP14.93□□□□□ -0.02
CHD4-210ENST00000544040 RANBP3Q9H6Z4 567 aaPredicted RBP14.93□□□□□ -0.02
CHD4-210ENST00000544040 COL20A1Q9P218 1284 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 CFIP05156 583 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 STT3AP46977 705 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 ZNF283Q8N7M2 679 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 ARNTL2Q8WYA1 636 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 TRIB2Q92519 343 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 OSTF1Q92882 214 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 SLC22A18Q96BI1 424 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 POLMQ9NP87 494 aaPredicted RBP14.93□□□□□ -0.02
CHD4-210ENST00000544040 ERVK13-1Q9NX77 482 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 DKKL1Q9UK85 242 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 ZNF451Q9Y4E5 1061 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 SNAP29O95721 258 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 AGTR2P50052 363 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 FUT2Q10981 343 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 PTPRCAPQ14761 206 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 RGMBQ6NW40 437 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 OR4K1Q8NGD4 311 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 NEIL3Q8TAT5 605 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 AUTS2Q8WXX7 1259 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 TCEAL4Q96EI5 215 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 C16orf58Q96GQ5 468 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 MAELQ96JY0 434 aaKnown RBP14.93□□□□□ -0.02
CHD4-210ENST00000544040 HAPLN3Q96S86 360 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 FBRSQ9HAH7 460 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 POT1Q9NUX5 634 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 ERVK-19Q9WJR5 959 aa14.93□□□□□ -0.02
CHD4-210ENST00000544040 CLEC3AO75596 197 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 SMPD1P17405 629 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 ST3GAL4Q11206 333 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 TMEM69Q5SWH9 247 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 TMEM156Q8N614 296 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 ZSCAN1Q8NBB4 408 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 CAMKVQ8NCB2 501 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 PXYLP1Q8TE99 480 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 LRRIQ1Q96JM4 1722 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 ATRNL1Q5VV63 1379 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 CELP19835 753 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 NAA10P41227 235 aaPredicted RBP14.92□□□□□ -0.02
CHD4-210ENST00000544040 GAS6Q14393 721 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 PON2Q15165 354 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 ARHGAP40Q5TG30 622 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 ZC3HC1Q86WB0 502 aaKnown RBP14.92□□□□□ -0.02
CHD4-210ENST00000544040 ZNF584Q8IVC4 421 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 CLDN19Q8N6F1 224 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 GAS2L1Q99501 681 aaPredicted RBP14.92□□□□□ -0.02
CHD4-210ENST00000544040 FBRSL1Q9HCM7 1045 aaKnown RBP14.92□□□□□ -0.02
CHD4-210ENST00000544040 BORCS7-ASMTA0A0B4J1R7 106 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 A0A1W2PP18 115 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 H7C417 338 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 PIK3CBP42338 1070 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 KCNJ11Q14654 390 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 RFTN1Q14699 578 aaPredicted RBP14.92□□□□□ -0.02
CHD4-210ENST00000544040 GNMTQ14749 295 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 TIGD5Q53EQ6 642 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 C22orf42Q6IC83 251 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 POLDIP3Q9BY77 421 aaKnown RBP14.92□□□□□ -0.02
CHD4-210ENST00000544040 PIGVQ9NUD9 493 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 NLGN3Q9NZ94 848 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 BCAS2O75934 225 aaPredicted RBP14.92□□□□□ -0.02
CHD4-210ENST00000544040 PET100P0DJ07 73 aa14.92□□□□□ -0.02
CHD4-210ENST00000544040 ZNF41P51814 821 aaPredicted RBP14.92□□□□□ -0.02
CHD4-210ENST00000544040 TAS2R43P59537 309 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms