RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 A0A087WXM4 84 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 CCDC160A6NGH7 325 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 hCG_2039718K7EN88 272 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 HS6ST1O60243 411 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 KDM1AO60341 852 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 SEMG1P04279 462 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 SERPIND1P05546 499 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 DDCP20711 480 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 ARHGDIAP52565 204 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 CDH15P55291 814 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 CLDN2P57739 230 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 KIAA1024LP59773 190 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 PLCL1Q15111 1095 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 RPE65Q16518 533 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 COX20Q5RI15 118 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 TTC23Q5W5X9 447 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 OR2T5Q6IEZ7 315 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 TRIM40Q6P9F5 258 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 SHQ1Q6PI26 577 aaKnown RBP16.3■□□□□ 0.2
PTPRO-209ENST00000543886 TMEM26Q6ZUK4 368 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 TMEM179BQ7Z7N9 219 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 MMP21Q8N119 569 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 PJA1Q8NG27 643 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 OR2A1Q8NGT9 310 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 OR2T29Q8NH02 315 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 MRGPRX1Q96LB2 322 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 TUBA8Q9NY65 449 aaPredicted RBP16.3■□□□□ 0.2
PTPRO-209ENST00000543886 ACSL6Q9UKU0 697 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 ICKQ9UPZ9 632 aa16.3■□□□□ 0.2
PTPRO-209ENST00000543886 COL4A2P08572 1712 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 SUV39H1O43463 412 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 BMP10O95393 424 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 ETFAP13804 333 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 AQP1P29972 269 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 ALDH9A1P49189 494 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 FADDQ13158 208 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 HEPACAMQ14CZ8 416 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 TTLQ8NG68 377 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 OR5AK3PQ8NH89 298 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 TBC1D20Q96BZ9 403 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 MUS81Q96NY9 551 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 MRPS30Q9NP92 439 aaKnown RBP16.29■□□□□ 0.2
PTPRO-209ENST00000543886 TRPV5Q9NQA5 729 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 C3orf18Q9UK00 162 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 DMTF1Q9Y222 760 aa16.29■□□□□ 0.2
PTPRO-209ENST00000543886 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.29■□□□□ 0.2
PTPRO-209ENST00000543886 POM121BA6NF01 834 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 MYO1GB0I1T2 1018 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 CLEC3AO75596 197 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 KRT75O95678 551 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 HOXC4P09017 264 aaPredicted RBP16.28■□□□□ 0.2
PTPRO-209ENST00000543886 GRK3P35626 688 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 PRIM2P49643 509 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 MVDP53602 400 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 CASP9P55211 416 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 TPD52P55327 224 aaPredicted RBP16.28■□□□□ 0.2
PTPRO-209ENST00000543886 PRSS53Q2L4Q9 553 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 ENPP7Q6UWV6 458 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 PLD3Q8IV08 490 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 ADGRF3Q8IZF5 1079 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 ARL10Q8N8L6 244 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 DENND6BQ8NEG7 585 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 ZFP28Q8NHY6 868 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 TM4SF18Q96CE8 201 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 YTHDF1Q9BYJ9 559 aaKnown RBP16.28■□□□□ 0.2
PTPRO-209ENST00000543886 ING2Q9H160 280 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 ZNF576Q9H609 170 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 FAM118AQ9NWS6 357 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 VNN3Q9NY84 501 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 COLEC10Q9Y6Z7 277 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 IGKV1-8A0A0C4DH67 115 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 TRBC2A0A5B9 178 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 TNFRSF21O75509 655 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 PRKACGP22612 351 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 GSTM5P46439 218 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 RBBP4Q09028 425 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 LSAMPQ13449 338 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 NFATC4Q14934 902 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 RFX4Q33E94 735 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 EOGTQ5NDL2 527 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 ARHGAP22Q7Z5H3 698 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 RNF130Q86XS8 419 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 C8orf59Q8N0T1 100 aaPredicted RBP16.28■□□□□ 0.2
PTPRO-209ENST00000543886 NATD1Q8N6N6 113 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 RPLP0P6Q8NHW5 317 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 MBOAT4Q96T53 435 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 GPATCH2Q9NW75 528 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 ADAM29Q9UKF5 820 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 MAP4K5Q9Y4K4 846 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 SNX8Q9Y5X2 465 aa16.28■□□□□ 0.2
PTPRO-209ENST00000543886 PDPK1O15530 556 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 LCMT2O60294 686 aaKnown RBP16.27■□□□□ 0.2
PTPRO-209ENST00000543886 NDUFV2P19404 249 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 UQCRC2P22695 453 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 HTR1BP28222 390 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 RAD23AP54725 363 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 ABATP80404 500 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 VLDLRP98155 873 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 SCARB2Q14108 478 aa16.27■□□□□ 0.2
PTPRO-209ENST00000543886 TDHQ8IZJ6 230 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms