RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 OR13C3Q8NGS6 347 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 OR4Q3Q8NH05 313 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 FER1L6-AS2Q96M78 137 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 ADAM2Q99965 735 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 THTPAQ9BU02 230 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 SOX17Q9H6I2 414 aaPredicted RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 PKD2L1Q9P0L9 805 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 DHCR7Q9UBM7 475 aaKnown RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 MYRFQ9Y2G1 1151 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 IGSF9BQ9UPX0 1349 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 PQLC2LA1A4F0 135 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 NFIBO00712 420 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 GPR39O43194 453 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 SUV39H1O43463 412 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF780AO75290 641 aaPredicted RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 SORBS2O94875 1100 aaKnown RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 RPLP2P05387 115 aaKnown RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 IL7P13232 177 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 ABCD3P28288 659 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF81P51508 661 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF200P98182 395 aaPredicted RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 CSTF1Q05048 431 aaKnown RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 TMEM119Q4V9L6 283 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 FAM182AQ5T1J6 154 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 FAM46CQ5VWP2 391 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 SPNS3Q6ZMD2 512 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 CACUL1Q86Y37 369 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 TMPRSS6Q8IU80 811 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 TAAR9Q96RI9 348 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 NT5C1AQ9BXI3 368 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 CXorf21Q9HAI6 301 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 SMURF2Q9HAU4 748 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 KCNG2Q9UJ96 466 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 PCDHA4Q9UN74 947 aa8.58□□□□□ -1.04
VPS13D-212ENST00000543766 KLF2Q9Y5W3 355 aaPredicted RBP8.58□□□□□ -1.04
VPS13D-212ENST00000543766 SERPINE3A8MV23 424 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 MID1O15344 667 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 PSTPIP1O43586 416 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 GPRIN2O60269 458 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 IFNA21P01568 189 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 EPORP19235 508 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 CD247P20963 164 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 VEGFCP49767 419 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 GBX1Q14549 363 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 RNF212Q495C1 297 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 DDI2Q5TDH0 399 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 LBX2Q6XYB7 198 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF679Q8IYX0 411 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 C12orf29Q8N999 325 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 CCDC126Q96EE4 140 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF479Q96JC4 524 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 RPL10LQ96L21 214 aaKnown RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 TOX2Q96NM4 488 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 ACBD6Q9BR61 282 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 TIMM29Q9BSF4 260 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 TMED9Q9BVK6 235 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 ZBTB3Q9H5J0 574 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF385DQ9H6B1 395 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 CARS2Q9HA77 564 aaKnown RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 ZNF302Q9NR11 478 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 C14orf119Q9NWQ9 140 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 SEC14L4Q9UDX3 406 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 PUS1Q9Y606 427 aaKnown RBP eCLIP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 SLC15A5A6NIM6 579 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 KHNYNO15037 678 aaKnown RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 MRPS14O60783 128 aaKnown RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 RHOP08100 348 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 CD1BP29016 333 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 CPOXP36551 454 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 HSF5Q4G112 596 aaPredicted RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 PLET1Q6UQ28 207 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 ABHD13Q7L211 337 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 NANOGP1Q8N7R0 232 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 PPP1R14AQ96A00 147 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 AKT1S1Q96B36 256 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 MED8Q96G25 268 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 FUBP3Q96I24 572 aaKnown RBP eCLIP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 RNF145Q96MT1 663 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 OSBPL11Q9BXB4 747 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 HDHD5Q9BXW7 423 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 MRPL4Q9BYD3 311 aaKnown RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 ELOVL4Q9GZR5 314 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 ASB8Q9H765 288 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 OBP2BQ9NPH6 170 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 TEX10Q9NXF1 929 aaPredicted RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 B3GNT2Q9NY97 397 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 OR12D3Q9UGF7 316 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 H3BNX3 289 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 RPP14O95059 124 aaKnown RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 SNRPB2P08579 225 aaKnown RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 PSMC3P17980 439 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 LPOP22079 712 aaPredicted RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 COILP38432 576 aaPredicted RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 OPRL1P41146 370 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 CLCN5P51795 746 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 EIF6P56537 245 aaKnown RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 NCR3LG1Q68D85 454 aa8.57□□□□□ -1.04
VPS13D-212ENST00000543766 HAGHLQ6PII5 290 aaPredicted RBP8.57□□□□□ -1.04
VPS13D-212ENST00000543766 REC114Q7Z4M0 266 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms