RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 RPH3AQ9Y2J0 694 aaPredicted RBP6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 NUMBLQ9Y6R0 609 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 GLOD5A6NK44 160 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 WASHC1A8K0Z3 465 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 WASH3PC4AMC7 463 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 PSMD11O00231 422 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 PROS1P07225 676 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 HBQ1P09105 142 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 POU2F1P14859 743 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 SOX9P48436 509 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 PCP4P48539 62 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 DNASE1L1P49184 302 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 RAB28P51157 221 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 CLCN4P51793 760 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 LASP1Q14847 261 aaKnown RBP6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 MAPK14Q16539 360 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 TMEM95Q3KNT9 176 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM26DQ5JW98 314 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 DUS1LQ6P1R4 473 aaKnown RBP6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 WASH2PQ6VEQ5 465 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 OR6K6Q8NGW6 343 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 STRA6Q9BX79 667 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 KLF16Q9BXK1 252 aaPredicted RBP6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 PNPLA3Q9NST1 481 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 FADS3Q9Y5Q0 445 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM155AB1AL88 458 aaPredicted RBP6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 H7C1Q1 480 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 ADAM12O43184 909 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 CER1O95813 267 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 BCHEP06276 602 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 CD2P06729 351 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 GP1BBP13224 206 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 ITGA3P26006 1051 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 ITGB7P26010 798 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 GJA4P35212 333 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 KCNC1P48547 511 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 ACY1Q03154 408 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 CD47Q08722 323 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 TARDBPQ13148 414 aaKnown RBP eCLIP6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 KLF1Q13351 362 aaPredicted RBP6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM189A2Q15884 450 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 ZSWIM7Q19AV6 140 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 MSS51Q4VC12 460 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM78AQ5JUQ0 283 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 CEACAM20Q6UY09 585 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 Q6ZSR6 202 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 HDDC2Q7Z4H3 204 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 TSPAN33Q86UF1 283 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 NRROSQ86YC3 692 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 ZZZ3Q8IYH5 903 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 GOLM1Q8NBJ4 401 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 VN1R2Q8NFZ6 395 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 TSPAN14Q8NG11 270 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 C1GALT1C1Q96EU7 318 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 IL17FQ96PD4 163 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 KCNC2Q96PR1 638 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 CIB1Q99828 191 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 PELOQ9BRX2 385 aaKnown RBP6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 FAM120CQ9NX05 1096 aaKnown RBP6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 EHD3Q9NZN3 535 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 DNMT3BQ9UBC3 853 aaKnown RBP6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 IRAK3Q9Y616 596 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 SESN1Q9Y6P5 492 aa6.65□□□□□ -1.34
SRGAP1-206ENST00000543397 PKD1L3Q7Z443 1732 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 BCKDKO14874 412 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 KIAA0355O15063 1070 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC22A2O15244 555 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 HMGB3O15347 200 aaKnown RBP6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 GSC2O15499 205 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 SERPINA3P01011 423 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 CYP17A1P05093 508 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 GLULP15104 373 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 ENGP17813 658 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 OR4D2P58180 307 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 RPS15AP62244 130 aaKnown RBP6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 TBPL1P62380 186 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 CCNIQ14094 377 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 TCTE1Q5JU00 501 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 CATSPEREQ5SY80 951 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 SWT1Q5T5J6 900 aaKnown RBP6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 UBAP2Q5T6F2 1119 aaKnown RBP6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 PSAPL1Q6NUJ1 521 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 MFSD6LQ8IWD5 586 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF433Q8N7K0 673 aaPredicted RBP6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 OR6N1Q8NGY5 312 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 SPPL3Q8TCT6 385 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 AP3S1Q92572 193 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 PNPLA2Q96AD5 504 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 HSPBAP1Q96EW2 488 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 MSANTD3Q96H12 275 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 CLPTM1LQ96KA5 538 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF717Q9BY31 904 aaPredicted RBP6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 WDR45Q9Y484 360 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 MPZL2O60487 215 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 FADS2O95864 444 aaKnown RBP6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 CREB1P16220 341 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 NCK1P16333 377 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 BPIP17213 487 aa6.65□□□□□ -1.35
SRGAP1-206ENST00000543397 LEPRP48357 1165 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms