RNA–Protein interactions for RNA: ENST00000543042.5

CLPB-212, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-212ENST00000543042 FBXL20Q96IG2 436 aa17.14■□□□□ 0.33
CLPB-212ENST00000543042 SLC35A5Q9BS91 424 aa17.14■□□□□ 0.33
CLPB-212ENST00000543042 USP36Q9P275 1121 aaKnown RBP17.14■□□□□ 0.33
CLPB-212ENST00000543042 KLF15Q9UIH9 416 aa17.14■□□□□ 0.33
CLPB-212ENST00000543042 CA14Q9ULX7 337 aa17.14■□□□□ 0.33
CLPB-212ENST00000543042 A0A1W2PRB8 838 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 LRIT2A6NDA9 550 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 PRKRAO75569 313 aaKnown RBP17.13■□□□□ 0.33
CLPB-212ENST00000543042 DIRAS1O95057 198 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 CCNDBP1O95273 360 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 CELA2BP08218 269 aaPredicted RBP17.13■□□□□ 0.33
CLPB-212ENST00000543042 FAM58BPP0C7Q3 252 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 SMIM18P0DKX4 95 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 CHRNB1P11230 501 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 PRKACGP22612 351 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 KDELR2P33947 212 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 MERTKQ12866 999 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 HYAL2Q12891 473 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 ZIK1Q3SY52 487 aaPredicted RBP17.13■□□□□ 0.33
CLPB-212ENST00000543042 ZNF793Q6ZN11 406 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 STK32CQ86UX6 486 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 AMIGO1Q86WK6 493 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.13■□□□□ 0.33
CLPB-212ENST00000543042 PACRGLQ8N7B6 248 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 CYGBQ8WWM9 190 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 ADI1Q9BV57 179 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 ATAD3AQ9NVI7 634 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 COLEC10Q9Y6Z7 277 aa17.13■□□□□ 0.33
CLPB-212ENST00000543042 GCM2O75603 506 aaPredicted RBP17.12■□□□□ 0.33
CLPB-212ENST00000543042 AKT2P31751 481 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 RPS9P46781 194 aaKnown RBP17.12■□□□□ 0.33
CLPB-212ENST00000543042 SNRPNP63162 240 aaKnown RBP17.12■□□□□ 0.33
CLPB-212ENST00000543042 SLC5A12Q1EHB4 618 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 GOT1L1Q8NHS2 421 aaPredicted RBP17.12■□□□□ 0.33
CLPB-212ENST00000543042 GPR174Q9BXC1 333 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 TPSD1Q9BZJ3 242 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 KIR3DX1Q9H7L2 352 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 NT5DC2Q9H857 520 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 SMURF2Q9HAU4 748 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 ZNF282Q9UDV7 671 aaPredicted RBP17.12■□□□□ 0.33
CLPB-212ENST00000543042 MAPRE3Q9UPY8 281 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 MAP4K5Q9Y4K4 846 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 LAMA1P25391 3075 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 SOX1O00570 391 aaPredicted RBP17.12■□□□□ 0.33
CLPB-212ENST00000543042 CAPN5O15484 640 aaPredicted RBP17.12■□□□□ 0.33
CLPB-212ENST00000543042 SEMA3DO95025 777 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 CHRM5P08912 532 aaPredicted RBP17.12■□□□□ 0.33
CLPB-212ENST00000543042 GLULP15104 373 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 PXNP49023 591 aaPredicted RBP17.12■□□□□ 0.33
CLPB-212ENST00000543042 MAP7Q14244 749 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 TRIM73Q86UV7 250 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 DEFB119Q8N690 84 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 FAM47BQ8NA70 645 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 RGMAQ96B86 450 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 RAB11FIP5Q9BXF6 653 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 LTB4R2Q9NPC1 389 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 VNN3Q9NY84 501 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 TAS2R9Q9NYW1 312 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 PDP2Q9P2J9 529 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 DNAJB9Q9UBS3 223 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 ABCG2Q9UNQ0 655 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.12■□□□□ 0.33
CLPB-212ENST00000543042 SNX8Q9Y5X2 465 aa17.12■□□□□ 0.33
CLPB-212ENST00000543042 A6NCN8 305 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 hCG_2039718K7EN88 272 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 GNGT2O14610 69 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 NOBOXO60393 691 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 SRFP11831 508 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 DDCP20711 480 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 SOAT1P35610 550 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 SFSWAPQ12872 951 aaKnown RBP17.11■□□□□ 0.33
CLPB-212ENST00000543042 LAPTM4AQ15012 233 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 CYBRD1Q53TN4 286 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 OR4C11Q6IEV9 310 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 RNF130Q86XS8 419 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 OFCC1Q8IZS5 231 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 EXOSC8Q96B26 276 aaKnown RBP17.11■□□□□ 0.33
CLPB-212ENST00000543042 ANKRD60Q9BZ19 345 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 CXorf56Q9H5V9 222 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 CXorf36Q9H7Y0 433 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 OLAHQ9NV23 265 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 FAF1Q9UNN5 650 aaPredicted RBP17.11■□□□□ 0.33
CLPB-212ENST00000543042 TRBC2A0A5B9 178 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 GLOD5A6NK44 160 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 SEC24DO94855 1032 aaPredicted RBP17.11■□□□□ 0.33
CLPB-212ENST00000543042 ATP6V1B1P15313 513 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 PTGER1P34995 402 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 ARSFP54793 590 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 TDGQ13569 410 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 SLC36A3Q495N2 470 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 IKBIPQ70UQ0 350 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 NUDT13Q86X67 352 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 KLHL25Q9H0H3 589 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 LMAN1LQ9HAT1 526 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 POLMQ9NP87 494 aaPredicted RBP17.11■□□□□ 0.33
CLPB-212ENST00000543042 TMEM184CQ9NVA4 438 aa17.11■□□□□ 0.33
CLPB-212ENST00000543042 SMPD3Q9NY59 655 aaPredicted RBP17.11■□□□□ 0.33
CLPB-212ENST00000543042 C10orf142B7Z368 130 aa17.1■□□□□ 0.33
CLPB-212ENST00000543042 G3V2T6 193 aa17.1■□□□□ 0.33
CLPB-212ENST00000543042 CLEC3AO75596 197 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms