RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 KCNC2Q96PR1 638 aa19.71■□□□□ 0.75
OTUB1-211ENST00000543004 B3GNT4Q9C0J1 378 aa19.71■□□□□ 0.75
OTUB1-211ENST00000543004 THSD1Q9NS62 852 aa19.71■□□□□ 0.75
OTUB1-211ENST00000543004 FGFR1OP2Q9NVK5 253 aa19.71■□□□□ 0.75
OTUB1-211ENST00000543004 SLC28A1O00337 649 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 HDAC3O15379 428 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 VIMP08670 466 aaKnown RBP19.7■□□□□ 0.74
OTUB1-211ENST00000543004 ATP5A1P25705 553 aaKnown RBP19.7■□□□□ 0.74
OTUB1-211ENST00000543004 SSR2P43308 183 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 ABHD18Q0P651 414 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 SF3A3Q12874 501 aaKnown RBP eCLIP19.7■□□□□ 0.746e-10■■■□□ 14.8
OTUB1-211ENST00000543004 RUNX2Q13950 521 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 NR6A1Q15406 480 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 TGIF1Q15583 401 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 GALNTL6Q49A17 601 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 NKAIN1Q4KMZ8 207 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 C6orf15Q6UXA7 325 aaPredicted RBP19.7■□□□□ 0.74
OTUB1-211ENST00000543004 COX15Q7KZN9 410 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 COMMD6Q7Z4G1 85 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 METTL4Q8N3J2 472 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 ACOT4Q8N9L9 421 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 CHTF18Q8WVB6 975 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 MR1Q95460 341 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 COL26A1Q96A83 441 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 TBCDQ9BTW9 1192 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 CHST8Q9H2A9 424 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 WDR55Q9H6Y2 383 aaPredicted RBP19.7■□□□□ 0.74
OTUB1-211ENST00000543004 ZNF304Q9HCX3 659 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 ANGPTL2Q9UKU9 493 aa19.7■□□□□ 0.74
OTUB1-211ENST00000543004 LSM1O15116 133 aaKnown RBP19.69■□□□□ 0.74
OTUB1-211ENST00000543004 RGS14O43566 566 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 PEX11AO75192 247 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 SEMA3DO95025 777 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 KLK1P06870 262 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 HIST1H1TP22492 207 aaPredicted RBP19.69■□□□□ 0.74
OTUB1-211ENST00000543004 AVPR1BP47901 424 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 HK2P52789 917 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 RAE1P78406 368 aaKnown RBP19.69■□□□□ 0.74
OTUB1-211ENST00000543004 SHC2P98077 582 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 AP5B1Q2VPB7 878 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 CGB2Q6NT52 195 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 PROKR1Q8TCW9 393 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 MVB12AQ96EY5 273 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 LRFN5Q96NI6 719 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 ZNF317Q96PQ6 595 aaPredicted RBP19.69■□□□□ 0.74
OTUB1-211ENST00000543004 CENPKQ9BS16 269 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 USH1CQ9Y6N9 552 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 GOLGA8QA0A0J9YX86 632 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 GOLGA8OA6NCC3 632 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 GOLGA8NF8WBI6 632 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 STMND1H3BQB6 276 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 RAD1O60671 282 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 RSL1D1O76021 490 aaKnown RBP19.69■□□□□ 0.74
OTUB1-211ENST00000543004 TPP2P29144 1249 aaPredicted RBP19.69■□□□□ 0.74
OTUB1-211ENST00000543004 EPHA3P29320 983 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 SEC24CP53992 1094 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 MTTPP55157 894 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 DCDP81605 110 aaKnown RBP19.69■□□□□ 0.74
OTUB1-211ENST00000543004 KIAA0040Q15053 153 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 TBC1D25Q3MII6 688 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 SLC9B1Q4ZJI4 515 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 RFTN2Q52LD8 501 aaPredicted RBP19.69■□□□□ 0.74
OTUB1-211ENST00000543004 ARHGAP40Q5TG30 622 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 FAM69BQ5VUD6 431 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 ZNF517Q6ZMY9 492 aaPredicted RBP19.69■□□□□ 0.74
OTUB1-211ENST00000543004 SRFBP1Q8NEF9 429 aaKnown RBP19.69■□□□□ 0.74
OTUB1-211ENST00000543004 TUBGCP3Q96CW5 907 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 EBPLQ9BY08 206 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 COPS7BQ9H9Q2 264 aaPredicted RBP19.69■□□□□ 0.74
OTUB1-211ENST00000543004 MEAF6Q9HAF1 191 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 LRTM1Q9HBL6 345 aa19.69■□□□□ 0.74
OTUB1-211ENST00000543004 DMXL2Q8TDJ6 3036 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 H0YIG0 161 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 SDHDO14521 159 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 TMPRSS11DO60235 418 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 SEC22BO75396 215 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 KLK3P07288 261 aaPredicted RBP19.68■□□□□ 0.74
OTUB1-211ENST00000543004 FBLP22087 321 aaKnown RBP19.68■□□□□ 0.74
OTUB1-211ENST00000543004 GNGT1P63211 74 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 TGM3Q08188 693 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 PRMT9Q6P2P2 845 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 DTX1Q86Y01 620 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 NLGN4XQ8N0W4 816 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 NLGN4YQ8NFZ3 816 aaPredicted RBP19.68■□□□□ 0.74
OTUB1-211ENST00000543004 RFWD2Q8NHY2 731 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 C11orf24Q96F05 449 aaPredicted RBP19.68■□□□□ 0.74
OTUB1-211ENST00000543004 ZNF578Q96N58 590 aaPredicted RBP19.68■□□□□ 0.74
OTUB1-211ENST00000543004 SERINC2Q96SA4 455 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 YIPF2Q9BWQ6 316 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 RBCK1Q9BYM8 510 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 DDX31Q9H8H2 851 aaKnown RBP19.68■□□□□ 0.74
OTUB1-211ENST00000543004 AKTIPQ9H8T0 292 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 NPHS2Q9NP85 383 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 NMRK1Q9NWW6 199 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 CTSFQ9UBX1 484 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 VTI1BQ9UEU0 232 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 PADI1Q9ULC6 663 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 CDC14AQ9UNH5 594 aa19.68■□□□□ 0.74
OTUB1-211ENST00000543004 POLR3HQ9Y535 204 aaPredicted RBP19.68■□□□□ 0.74
OTUB1-211ENST00000543004 A0A0A6YYD5 115 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms