RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 TLR4O00206 839 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 DNALI1O14645 258 aaPredicted RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 ZSCAN9O15535 394 aaPredicted RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 SLC28A2O43868 658 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 SNX2O60749 519 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 RECQL5O94762 991 aaPredicted RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 ACTL6BO94805 426 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 METTL18O95568 372 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 PAK4O96013 591 aaPredicted RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 PLAUP00749 431 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 IGHV4-34P06331 123 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 GSTA2P09210 222 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 ALPIP09923 528 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 ALPPL2P10696 532 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 SLC2A4P14672 509 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 PSMA3P25788 255 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 SPAM1P38567 509 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 GPR1P46091 355 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 KCNJ1P48048 391 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 RXRGP48443 463 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 SPINT3P49223 89 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 TTPAP49638 278 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 POLE2P56282 527 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 KIAA1024LP59773 190 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 HNRNPKP61978 463 aaKnown RBP eCLIP4.3□□□□□ -1.72
MDM2-228ENST00000542502 PRAMEP78395 509 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 PLOD1Q02809 727 aaPredicted RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 KPNB1Q14974 876 aaKnown RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 CLCA4Q14CN2 919 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 CNGA3Q16281 694 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 ST3GAL2Q16842 350 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 LDLRAP1Q5SW96 308 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 LRRC66Q68CR7 880 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 PNCKQ6P2M8 343 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 KLHL17Q6TDP4 642 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 CLEC9AQ6UXN8 241 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 MACC1Q6ZN28 852 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 CENPUQ71F23 418 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 ABI3BPQ7Z7G0 1075 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 SDCCAG8Q86SQ7 713 aaPredicted RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 LRRC6Q86X45 466 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 CACUL1Q86Y37 369 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 SLC44A2Q8IWA5 706 aaPredicted RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 FSTL5Q8N475 847 aaPredicted RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 MMGT1Q8N4V1 131 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 TRAM1L1Q8N609 369 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 METTL25Q8N6Q8 603 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 SUMF1Q8NBK3 374 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 OR6C4Q8NGE1 309 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 BLOC1S5Q8TDH9 187 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 BCAS4Q8TDM0 211 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 ABHD5Q8WTS1 349 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 RLN3Q8WXF3 142 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 PIGKQ92643 395 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 CENPTQ96BT3 561 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 FAM122AQ96E09 287 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 VPS35Q96QK1 796 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 KRT12Q99456 494 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 RTKNQ9BST9 563 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 WRAP53Q9BUR4 548 aaKnown RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 FICDQ9BVA6 458 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 SCNM1Q9BWG6 230 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 TM2D2Q9BX73 214 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 NUAK2Q9H093 628 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 C6orf106Q9H6K1 298 aaPredicted RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 TM9SF3Q9HD45 589 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 NLE1Q9NVX2 485 aaPredicted RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 SMOXQ9NWM0 555 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 C2orf42Q9NWW7 574 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 IL17CQ9P0M4 197 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 VPS18Q9P253 973 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.3□□□□□ -1.722e-6■■□□□ 12.9
MDM2-228ENST00000542502 GTF2A1LQ9UNN4 478 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 ICKQ9UPZ9 632 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 ZNF711Q9Y462 761 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 CSNK1G3Q9Y6M4 447 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 R4GN57 208 aa4.3□□□□□ -1.72
MDM2-228ENST00000542502 TNRC6BQ9UPQ9 1833 aaKnown RBP4.3□□□□□ -1.72
MDM2-228ENST00000542502 GPR179Q6PRD1 2367 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 PLXNA2O75051 1894 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 CEP250Q9BV73 2442 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 GLYATL1P3A0A0U1RQE8 302 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 SPTY2D1-AS1A0A0U1RR47 76 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 FAM237BA0A1B0GVD1 139 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 PRR23AA6NEV1 266 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 NPIPB15A6NHN6 443 aaPredicted RBP4.29□□□□□ -1.72
MDM2-228ENST00000542502 OR5K4A6NMS3 321 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 H3BMM5 538 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 RRHO14718 337 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 SLC31A1O15431 190 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 TTI1O43156 1089 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 FAM155BO75949 473 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 SEC31AO94979 1220 aaKnown RBP4.29□□□□□ -1.72
MDM2-228ENST00000542502 SLC25A14O95258 325 aaPredicted RBP4.29□□□□□ -1.72
MDM2-228ENST00000542502 CLDN7O95471 211 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 AGTP01019 485 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 TNFP01375 233 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 CSF2P04141 144 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 THEGLP0DJG4 465 aa4.29□□□□□ -1.72
MDM2-228ENST00000542502 CTPS1P17812 591 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms