RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 C1QTNF7Q9BXJ2 289 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 PHPT1Q9NRX4 125 aaPredicted RBP9.44□□□□□ -0.9
SS18-205ENST00000542420 TAS2R7Q9NYW3 318 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 SH3BP4Q9P0V3 963 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 UTS2RQ9UKP6 389 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 ERVK-11Q9UQG0 969 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.44□□□□□ -0.9
SS18-205ENST00000542420 SAMHD1Q9Y3Z3 626 aaKnown RBP9.44□□□□□ -0.9
SS18-205ENST00000542420 NUMA1Q14980 2115 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 ANKDD1BA6NHY2 528 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 PRR19A6NJB7 356 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 CAPN5O15484 640 aaPredicted RBP9.44□□□□□ -0.9
SS18-205ENST00000542420 CLEC3AO75596 197 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 PDE9AO76083 593 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 EPHX1P07099 455 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 EEF1B2P24534 225 aaKnown RBP9.44□□□□□ -0.9
SS18-205ENST00000542420 ELK4P28324 431 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 DRD3P35462 400 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 PIGAP37287 484 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 DAPP51397 102 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 ABATP80404 500 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 VLDLRP98155 873 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 HEPACAMQ14CZ8 416 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 CST6Q15828 149 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 PROX2Q3B8N5 592 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 POM121L1PQ3SYA9 428 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 TMEM35AQ53FP2 167 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 ZNF385BQ569K4 471 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 ADGRD2Q7Z7M1 963 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 MMAAQ8IVH4 418 aaKnown RBP9.44□□□□□ -0.9
SS18-205ENST00000542420 YAF2Q8IY57 180 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 GEMIN6Q8WXD5 167 aaKnown RBP9.44□□□□□ -0.9
SS18-205ENST00000542420 MENTQ9BUN1 341 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 PLGRKTQ9HBL7 147 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 A4GALTQ9NPC4 353 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 ACSS1Q9NUB1 689 aaPredicted RBP9.44□□□□□ -0.9
SS18-205ENST00000542420 PLCXD1Q9NUJ7 323 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 VNN3Q9NY84 501 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 EHD3Q9NZN3 535 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 SCML1Q9UN30 329 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 ABCG2Q9UNQ0 655 aa9.44□□□□□ -0.9
SS18-205ENST00000542420 MAGED1Q9Y5V3 778 aaPredicted RBP9.44□□□□□ -0.9
SS18-205ENST00000542420 A0A1W2PRB8 838 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 KLHL18O94889 574 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 SLC35G4P0C7Q5 338 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 DRD2P14416 443 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 CCNA2P20248 432 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 EFNA1P20827 205 aaPredicted RBP9.43□□□□□ -0.9
SS18-205ENST00000542420 TSFMP43897 325 aaKnown RBP9.43□□□□□ -0.9
SS18-205ENST00000542420 HMGA2P52926 109 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 METAP1P53582 386 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 IST1P53990 364 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 HBA1P69905 142 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 SCARB2Q14108 478 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 SMUG1Q53HV7 270 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 ISLR2Q6UXK2 745 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 FAM83HQ6ZRV2 1179 aaPredicted RBP9.43□□□□□ -0.9
SS18-205ENST00000542420 VN1R5Q7Z5H4 357 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 CYP4Z1Q86W10 505 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 ANKRD13BQ86YJ7 626 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 RASSF5Q8WWW0 418 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 FCGR1BQ92637 280 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 NEURL3Q96EH8 262 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 HRASLS5Q96KN8 279 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 NODALQ96S42 347 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 NLNQ9BYT8 704 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 ADNPQ9H2P0 1102 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 SOX17Q9H6I2 414 aaPredicted RBP9.43□□□□□ -0.9
SS18-205ENST00000542420 MVB12BQ9H7P6 319 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 KRT84Q9NSB2 600 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 KIF17Q9P2E2 1029 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 FAM8A1Q9UBU6 413 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 SH2B3Q9UQQ2 575 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 STON1Q9Y6Q2 735 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 HEATR5BQ9P2D3 2071 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 KRT87PA6NCN2 255 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 OTOL1A6NHN0 477 aaPredicted RBP9.43□□□□□ -0.9
SS18-205ENST00000542420 NDUFB5O43674 189 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 ANGPTL1O95841 491 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 C6orf47O95873 294 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 B3GALT4O96024 378 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 TAS2R50P59544 299 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 CAMK2BQ13554 666 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 WSCD2Q2TBF2 565 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 CTU2Q2VPK5 515 aaKnown RBP9.43□□□□□ -0.9
SS18-205ENST00000542420 SAXO2Q658L1 398 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 ZNF776Q68DI1 518 aaPredicted RBP9.43□□□□□ -0.9
SS18-205ENST00000542420 LAIR2Q6ISS4 152 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 CRTC3Q6UUV7 619 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 TMC5Q6UXY8 1006 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 RBM23Q86U06 439 aaKnown RBP9.43□□□□□ -0.9
SS18-205ENST00000542420 NUDT13Q86X67 352 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 NAGSQ8N159 534 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 TTC29Q8NA56 475 aaPredicted RBP9.43□□□□□ -0.9
SS18-205ENST00000542420 GPR156Q8NFN8 814 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 OR4C15Q8NGM1 316 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 OR2L8Q8NGY9 312 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 FOXJ1Q92949 421 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 PDXPQ96GD0 296 aa9.43□□□□□ -0.9
SS18-205ENST00000542420 SCARF2Q96GP6 870 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms