RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 SMIM24O75264 130 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 ETHE1O95571 254 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 HPP00738 406 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 FHP07954 510 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 C8orf89P0DMQ9 161 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 PLA2G2AP14555 144 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 MAOAP21397 527 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 PGDP52209 483 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 STXBP1P61764 594 aaKnown RBP9.16□□□□□ -0.94
YBX3-212ENST00000542002 TRAF3Q13114 568 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 AIMP2Q13155 320 aaKnown RBP9.16□□□□□ -0.94
YBX3-212ENST00000542002 MYBPC3Q14896 1274 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 NSDHLQ15738 373 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 CPSF6Q16630 551 aaKnown RBP eCLIP9.16□□□□□ -0.94
YBX3-212ENST00000542002 HIST2H2ACQ16777 129 aaPredicted RBP9.16□□□□□ -0.94
YBX3-212ENST00000542002 TUBB8Q3ZCM7 444 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 PAGE2BQ5JRK9 111 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 DEPDC1Q5TB30 811 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 MFSD4BQ5TF39 518 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 LIPJQ5W064 366 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 HIST2H2AA3Q6FI13 130 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 METTL2BQ6P1Q9 378 aaKnown RBP9.16□□□□□ -0.94
YBX3-212ENST00000542002 CPEB2Q7Z5Q1 589 aaKnown RBP9.16□□□□□ -0.94
YBX3-212ENST00000542002 RBMXL3Q8N7X1 1067 aaKnown RBP9.16□□□□□ -0.94
YBX3-212ENST00000542002 CLEC1AQ8NC01 280 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 OR2L5Q8NG80 312 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 WDR20Q8TBZ3 569 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 ACMSDQ8TDX5 336 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 ZNF483Q8TF39 744 aaPredicted RBP9.16□□□□□ -0.94
YBX3-212ENST00000542002 CAVIN3Q969G5 261 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 GAL3ST3Q96A11 431 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 ZBTB9Q96C00 473 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 MTFMTQ96DP5 389 aaKnown RBP9.16□□□□□ -0.94
YBX3-212ENST00000542002 THOC3Q96J01 351 aaKnown RBP9.16□□□□□ -0.94
YBX3-212ENST00000542002 SEC16BQ96JE7 1060 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 C1QTNF3Q9BXJ4 246 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 MS4A8Q9BY19 250 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 MFRPQ9BY79 579 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 OR51B5Q9H339 312 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 ACTR8Q9H981 624 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 SEMA4BQ9NPR2 832 aaPredicted RBP9.16□□□□□ -0.94
YBX3-212ENST00000542002 NECTIN3Q9NQS3 549 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 GPR83Q9NYM4 423 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 RAB21Q9UL25 225 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 ANGPTL3Q9Y5C1 460 aa9.16□□□□□ -0.94
YBX3-212ENST00000542002 IGKV3D-11A0A0A0MRZ8 115 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 NSG1A0A0A6YYJ2 146 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 TLDC2A0PJX2 215 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 URADA6NGE7 173 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 MAGEB17A8MXT2 336 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 SEC24DO94855 1032 aaPredicted RBP9.15□□□□□ -0.94
YBX3-212ENST00000542002 CLDN9O95484 217 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 RPS17P08708 135 aaKnown RBP9.15□□□□□ -0.94
YBX3-212ENST00000542002 NUDT17P0C025 328 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 PRR35P0CG20 571 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 KRT4P19013 534 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 IMPDH1P20839 514 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 IL10P22301 178 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 ATP5A1P25705 553 aaKnown RBP9.15□□□□□ -0.94
YBX3-212ENST00000542002 ITGA3P26006 1051 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 CERS1P27544 350 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 GSTM2P28161 218 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 PRKAA2P54646 552 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 LIM2P55344 173 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 RPS13P62277 151 aaKnown RBP9.15□□□□□ -0.94
YBX3-212ENST00000542002 DDX39BQ13838 428 aaKnown RBP9.15□□□□□ -0.94
YBX3-212ENST00000542002 ABRAXAS2Q15018 415 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 RASA2Q15283 850 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 ZRSR2Q15696 482 aaKnown RBP9.15□□□□□ -0.94
YBX3-212ENST00000542002 PLEKHN1Q494U1 663 aaPredicted RBP9.15□□□□□ -0.94
YBX3-212ENST00000542002 ZNF678Q5SXM1 525 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 KHDRBS2Q5VWX1 349 aaKnown RBP9.15□□□□□ -0.94
YBX3-212ENST00000542002 LETMD1Q6P1Q0 360 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 PRICKLE2Q7Z3G6 844 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 MYLK4Q86YV6 388 aaPredicted RBP9.15□□□□□ -0.94
YBX3-212ENST00000542002 ACOT4Q8N9L9 421 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 Q8NA96 180 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 OR4F6Q8NGB9 312 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 UBE2E3Q969T4 207 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 FAR2Q96K12 515 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 TMEM237Q96Q45 408 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 OR1F2PQ96R84 312 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 CSF3RQ99062 836 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 MAPKAP1Q9BPZ7 522 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 NTMT1Q9BV86 223 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 ZNF717Q9BY31 904 aaPredicted RBP9.15□□□□□ -0.94
YBX3-212ENST00000542002 LHPPQ9H008 270 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 EPN3Q9H201 632 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 CLK4Q9HAZ1 481 aaKnown RBP9.15□□□□□ -0.94
YBX3-212ENST00000542002 DMRT3Q9NQL9 472 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 FARSBQ9NSD9 589 aaKnown RBP9.15□□□□□ -0.94
YBX3-212ENST00000542002 DCDC2Q9UHG0 476 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 TMCO1Q9UM00 188 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 TSC22D4Q9Y3Q8 395 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 CSAG2Q9Y5P2 127 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 SCN3AQ9NY46 2000 aa9.15□□□□□ -0.94
YBX3-212ENST00000542002 RELNP78509 3460 aa9.14□□□□□ -0.95
YBX3-212ENST00000542002 MYOCOSA0A1B0GUC4 107 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms