RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 STMN4Q9H169 189 aaPredicted RBP8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 VIPAS39Q9H9C1 493 aa8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 SSU72Q9NP77 194 aaKnown RBP8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 PLA2G3Q9NZ20 509 aa8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 PTGFRNQ9P2B2 879 aa8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 OPTCQ9UBM4 332 aa8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 MID2Q9UJV3 735 aa8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 EMCNQ9ULC0 261 aa8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 SH2B3Q9UQQ2 575 aa8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 PLLPQ9Y342 182 aa8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 ASB1Q9Y576 335 aa8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 HS3ST3B1Q9Y662 390 aa8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 PRRC2CQ9Y520 2896 aaKnown RBP8.24□□□□□ -1.09
CLSTN3-212ENST00000541770 A0A0J9YVX5 310 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 TRBC2A0A5B9 178 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 DYTNA2CJ06 578 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 FITM1A5D6W6 292 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 GOLGA6L10A6NI86 522 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 TXNDC9O14530 226 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 PCDH17O14917 1159 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 HAT1O14929 419 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 CLGNO14967 610 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 TYROBPO43914 113 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 NRP2O60462 931 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 DLX3O60479 287 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 UGDHO60701 494 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 SIX3O95343 332 aaPredicted RBP8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 RPS17P08708 135 aaKnown RBP8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 MYZAPP0CAP1 466 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 C1GALT1C1LP0DN25 315 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 PIM1P11309 404 aaPredicted RBP8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 EPB42P16452 691 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 EPORP19235 508 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 CXCR2P25025 360 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 GSTM2P28161 218 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 EEF1DP29692 281 aaKnown RBP8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 GCGRP47871 477 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 TDGF1P3P51864 188 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 PRKAA2P54646 552 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 EMP3P54852 163 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 CASP6P55212 293 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 KRTAP10-9P60411 292 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 NAA20P61599 178 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 HERVK_113P63132 956 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 REEP5Q00765 189 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 RBPJQ06330 500 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 FBXO48Q5FWF7 155 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 CATSPEREQ5SY80 951 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 YOD1Q5VVQ6 348 aaPredicted RBP8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 KIRREL2Q6UWL6 708 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 ZYG11AQ6WRX3 759 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 ADCK2Q7Z695 626 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 TMPRSS11BQ86T26 416 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 CDH24Q86UP0 819 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 EXOC3L1Q86VI1 746 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 PRSS58Q8IYP2 241 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 TBC1D19Q8N5T2 526 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 SNX31Q8N9S9 440 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 NR4A3Q92570 626 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 PTCD3Q96EY7 689 aaKnown RBP8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 VPS50Q96JG6 964 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 TAAR6Q96RI8 345 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 SELENOSQ9BQE4 189 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 AIF1LQ9BQI0 150 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 ERVK-6Q9BXR3 956 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 TRIM8Q9BZR9 551 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 IQCGQ9H095 443 aaKnown RBP8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 NT5DC2Q9H857 520 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 TMBIM4Q9HC24 238 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 ZNF160Q9HCG1 818 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 SLC22A11Q9NSA0 550 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 SEC14L3Q9UDX4 400 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 PDZD2O15018 2839 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 OTOGQ6ZRI0 2925 aa8.23□□□□□ -1.09
CLSTN3-212ENST00000541770 SEC16AO15027 2179 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 F8P00451 2351 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 LOC105369274A0A096LPK9 316 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 LOC102723532A0A0G2JNH3 316 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 A0A1B0GX78 115 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 LRRC14BA6NHZ5 514 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 G3V2L1 256 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 H0YGG7 62 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 C19orf84I3L1E1 186 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 PRPF4O43172 522 aaKnown RBP eCLIP8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 LCMT2O60294 686 aaKnown RBP8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 PRAMEF4O60810 478 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 H2AFYO75367 372 aaKnown RBP8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 WFS1O76024 890 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 NADKO95544 446 aaPredicted RBP8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 MYL2P10916 166 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 IMPDH1P20839 514 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 SSTR2P30874 369 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 AHRP35869 848 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 BCL6P41182 706 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 CA7P43166 264 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 SCTRP47872 440 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 OR1D4P47884 311 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 ARSFP54793 590 aa8.22□□□□□ -1.09
CLSTN3-212ENST00000541770 VSX2P58304 361 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms