RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 ZNF860A6NHJ4 632 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 NDUFS4O43181 175 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 RDH16O75452 317 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 WFS1O76024 890 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 SORBS2O94875 1100 aaKnown RBP13.44□□□□□ -0.26
LTBR-209ENST00000541102 BMP10O95393 424 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 HPP00738 406 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 MYL2P10916 166 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 CPA3P15088 417 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 GNAZP19086 355 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 ETV4P43268 484 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 HERVK_113P63132 956 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 CHIT1Q13231 466 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 RBBP5Q15291 538 aaKnown RBP13.44□□□□□ -0.26
LTBR-209ENST00000541102 CCDC153Q494R4 210 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 MINDY4Q4G0A6 757 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 TTMPQ5BVD1 217 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 XKR6Q5GH73 641 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 ZNF678Q5SXM1 525 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 IGFL3Q6UXB1 125 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 VN1R5Q7Z5H4 357 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 PDSS2Q86YH6 399 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 C10orf107Q8IVU9 208 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 CNPY4Q8N129 248 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 Q8NA96 180 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 METTL21AQ8WXB1 218 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 ERVK-6Q9BXR3 956 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 AICDAQ9GZX7 198 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 NOL11Q9H8H0 719 aaKnown RBP13.44□□□□□ -0.26
LTBR-209ENST00000541102 SEMA4BQ9NPR2 832 aaPredicted RBP13.44□□□□□ -0.26
LTBR-209ENST00000541102 GPRC5BQ9NZH0 403 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 COPG2Q9UBF2 871 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 ZNF225Q9UK10 706 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 NAALAD2Q9Y3Q0 740 aa13.44□□□□□ -0.26
LTBR-209ENST00000541102 OR2W5A6NFC9 320 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 VPS4BO75351 444 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 KLHL18O94889 574 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 TBX6O95947 436 aaPredicted RBP13.43□□□□□ -0.26
LTBR-209ENST00000541102 B3GALT4O96024 378 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 COX6A1P12074 109 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 EPB42P16452 691 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 TAC1P20366 129 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 IMPDH1P20839 514 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 ALDH3A1P30838 453 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 HNF4AP41235 474 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 XCR1P46094 333 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 SCTRP47872 440 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 PIK3CGP48736 1102 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 MAGOHP61326 146 aaKnown RBP13.43□□□□□ -0.26
LTBR-209ENST00000541102 TRAF3Q13114 568 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 E2F2Q14209 437 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 CES4AQ5XG92 561 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 LINC00696Q6ZRV3 163 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 KBTBD2Q8IY47 623 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.43□□□□□ -0.26
LTBR-209ENST00000541102 RNF175Q8N4F7 328 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 CISD2Q8N5K1 135 aaKnown RBP13.43□□□□□ -0.26
LTBR-209ENST00000541102 CCDC63Q8NA47 563 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 L3HYPDHQ96EM0 354 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 WDR34Q96EX3 536 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 PKNOX2Q96KN3 472 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 SH3GL2Q99962 352 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 AIF1LQ9BQI0 150 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 SARGQ9BW04 601 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 C1QTNF3Q9BXJ4 246 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 ILKAPQ9H0C8 392 aaPredicted RBP13.43□□□□□ -0.26
LTBR-209ENST00000541102 GSTO2Q9H4Y5 243 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 IPPKQ9H8X2 491 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 OXSMQ9NWU1 459 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 SENP1Q9P0U3 644 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 ZFP69BQ9UJL9 534 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 TMCO1Q9UM00 188 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 VPS4AQ9UN37 437 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 B3GNT3Q9Y2A9 372 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 RNF11Q9Y3C5 154 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 TNPO3Q9Y5L0 923 aaKnown RBP13.43□□□□□ -0.26
LTBR-209ENST00000541102 SLC22A7Q9Y694 548 aa13.43□□□□□ -0.26
LTBR-209ENST00000541102 IGHV1-45A0A0A0MS14 117 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 IGHV3-20A0A0C4DH32 117 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 UBFD1O14562 309 aaKnown RBP13.42□□□□□ -0.26
LTBR-209ENST00000541102 CLGNO14967 610 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 H2AFYO75367 372 aaKnown RBP13.42□□□□□ -0.26
LTBR-209ENST00000541102 CELA2AP08217 269 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 C8orf89P0DMQ9 161 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 GNLYP22749 145 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 CASP2P42575 452 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 EFNA3P52797 238 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 NAGLUP54802 743 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 OLR1P78380 273 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 IRF8Q02556 426 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 RGS1Q08116 209 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 PCDH1Q08174 1060 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 HYAL2Q12891 473 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 PWP1Q13610 501 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 HERC3Q15034 1050 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 DEFB134Q4QY38 66 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 ISLR2Q6UXK2 745 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 CROCCP2Q86T23 111 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 AMER2Q8N7J2 671 aa13.42□□□□□ -0.26
LTBR-209ENST00000541102 CCNYL1Q8N7R7 359 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms