RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 YARS2Q9Y2Z4 477 aaKnown RBP24.98■■□□□ 1.59
CHFR-218ENST00000540963 PRRC2AP48634 2157 aaKnown RBP24.97■■□□□ 1.59
CHFR-218ENST00000540963 MAP1AP78559 2803 aaPredicted RBP24.97■■□□□ 1.59
CHFR-218ENST00000540963 TRBV11-1A0A0K0K1C0 115 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 OR14I1A6ND48 311 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 ZWINTO95229 277 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 SMIM10L1P0DMW3 83 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 GPS1Q13098 491 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 MYBPHQ13203 477 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 PHKG1Q16816 387 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 TGIF2LYQ8IUE0 185 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 TRPV3Q8NET8 790 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 ATL1Q8WXF7 558 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 VMP1Q96GC9 406 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 SMIM10Q96HG1 83 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 ZDHHC11Q9H8X9 412 aa24.97■■□□□ 1.59
CHFR-218ENST00000540963 ACOT7O00154 380 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 B3GALT4O96024 378 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 SERPIND1P05546 499 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 HOXB4P17483 251 aaPredicted RBP24.96■■□□□ 1.59
CHFR-218ENST00000540963 SSR4P51571 173 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 GPR85P60893 370 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 TIAL1Q01085 375 aaKnown RBP eCLIP24.96■■□□□ 1.59
CHFR-218ENST00000540963 CSHL1Q14406 222 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 ANKRD22Q5VYY1 191 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 RPRMLQ8N4K4 120 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 PSD4Q8NDX1 1056 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 OR5M3Q8NGP4 307 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 CREB3L4Q8TEY5 395 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 OR4K3Q96R72 315 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 ARL15Q9NXU5 204 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 FBXW2Q9UKT8 454 aa24.96■■□□□ 1.59
CHFR-218ENST00000540963 ABCA4P78363 2273 aa24.95■■□□□ 1.58
CHFR-218ENST00000540963 SYNDIG1LA6NDD5 238 aa24.95■■□□□ 1.58
CHFR-218ENST00000540963 PABPN1LA6NDY0 278 aaKnown RBP24.95■■□□□ 1.58
CHFR-218ENST00000540963 BCKDKO14874 412 aa24.95■■□□□ 1.58
CHFR-218ENST00000540963 FAM155BO75949 473 aa24.95■■□□□ 1.58
CHFR-218ENST00000540963 PDE9AO76083 593 aa24.95■■□□□ 1.58
CHFR-218ENST00000540963 MAGEA3P43357 314 aa24.95■■□□□ 1.58
CHFR-218ENST00000540963 GXYLT1Q4G148 440 aa24.95■■□□□ 1.58
CHFR-218ENST00000540963 GABPB2Q8TAK5 448 aaPredicted RBP24.95■■□□□ 1.58
CHFR-218ENST00000540963 PYCR2Q96C36 320 aa24.95■■□□□ 1.58
CHFR-218ENST00000540963 SERPINB12Q96P63 405 aa24.95■■□□□ 1.58
CHFR-218ENST00000540963 CCDC77Q9BR77 488 aa24.95■■□□□ 1.58
CHFR-218ENST00000540963 TRIM54Q9BYV2 358 aa24.95■■□□□ 1.58
CHFR-218ENST00000540963 ANKHD1Q8IWZ3 2542 aaKnown RBP24.95■■□□□ 1.58
CHFR-218ENST00000540963 ABCA2Q9BZC7 2435 aa24.95■■□□□ 1.58
CHFR-218ENST00000540963 FIGNL2A6NMB9 653 aa24.94■■□□□ 1.58
CHFR-218ENST00000540963 A8MUA0 341 aa24.94■■□□□ 1.58
CHFR-218ENST00000540963 MYO1DO94832 1006 aa24.94■■□□□ 1.58
CHFR-218ENST00000540963 ACVR2AP27037 513 aa24.94■■□□□ 1.58
CHFR-218ENST00000540963 CXCR5P32302 372 aa24.94■■□□□ 1.58
CHFR-218ENST00000540963 PPIAP62937 165 aaKnown RBP24.94■■□□□ 1.58
CHFR-218ENST00000540963 TRIP13Q15645 432 aaPredicted RBP24.94■■□□□ 1.58
CHFR-218ENST00000540963 CATSPEREQ5SY80 951 aa24.94■■□□□ 1.58
CHFR-218ENST00000540963 PAQR3Q6TCH7 311 aa24.94■■□□□ 1.58
CHFR-218ENST00000540963 SLC5A11Q8WWX8 675 aa24.94■■□□□ 1.58
CHFR-218ENST00000540963 FBXL8Q96CD0 374 aa24.94■■□□□ 1.58
CHFR-218ENST00000540963 DEFB127Q9H1M4 99 aa24.94■■□□□ 1.58
CHFR-218ENST00000540963 KCMF1Q9P0J7 381 aa24.94■■□□□ 1.58
CHFR-218ENST00000540963 ZNF223Q9UK11 482 aaPredicted RBP24.94■■□□□ 1.58
CHFR-218ENST00000540963 ERVK-11Q9UQG0 969 aa24.94■■□□□ 1.58
CHFR-218ENST00000540963 A8MVJ9 347 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 ZFAND5O76080 213 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 SERPINA6P08185 405 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 CCDC175P0C221 793 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 VPS41P49754 854 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 GPR143P51810 404 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 RAB8AP61006 207 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 HYAL2Q12891 473 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 HSP90AA5PQ58FG0 334 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 NDUFAF5Q5TEU4 345 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 SLC22A16Q86VW1 577 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 SCUBE1Q8IWY4 988 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 C2CD4AQ8NCU7 369 aaPredicted RBP24.93■■□□□ 1.58
CHFR-218ENST00000540963 NEIL2Q969S2 332 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 LINGO1Q96FE5 620 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 PDLIM2Q96JY6 352 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 PELI2Q9HAT8 420 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 DEPPQ9NTK1 212 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 HPF1Q9NWY4 346 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 DNAJB12Q9NXW2 375 aaKnown RBP24.93■■□□□ 1.58
CHFR-218ENST00000540963 EDARQ9UNE0 448 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 MAD1L1Q9Y6D9 718 aa24.93■■□□□ 1.58
CHFR-218ENST00000540963 GOLGA6L6A8MZA4 724 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 NPIPA2E9PIF3 369 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 NPIPA3F8WFD2 350 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 IGHG3P01860 377 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 ZFP36L2P47974 494 aaKnown RBP24.92■■□□□ 1.58
CHFR-218ENST00000540963 TERF1P54274 439 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 PPP2R2AP63151 447 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 REEP5Q00765 189 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 CA13Q8N1Q1 262 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 ANKRD53Q8N9V6 530 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.92■■□□□ 1.58
CHFR-218ENST00000540963 OR2M7Q8NG81 312 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 NDNQ99608 321 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 AIF1LQ9BQI0 150 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 TTYH2Q9BSA4 534 aa24.92■■□□□ 1.58
CHFR-218ENST00000540963 SPNS1Q9H2V7 528 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms