RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 OR52B6Q8NGF0 335 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 GPBAR1Q8TDU6 330 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 ZFPM2Q8WW38 1151 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 SMPDL3AQ92484 453 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 TFGQ92734 400 aaPredicted RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 NAT6Q93015 286 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 UTP4Q969X6 686 aaKnown RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 RCN3Q96D15 328 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 SPDL1Q96EA4 605 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 WDR34Q96EX3 536 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 LRGUKQ96M69 825 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 TMEM74Q96NL1 305 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 QRFPRQ96P65 431 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 CDRT15Q96T59 188 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 TMEM79Q9BSE2 394 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 DPY30Q9C005 99 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 ADA2Q9NZK5 511 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 C6orf203Q9P0P8 240 aaPredicted RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 STOX2Q9P2F5 926 aaPredicted RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 SUCOQ9UBS9 1254 aaKnown RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 SLC7A8Q9UHI5 535 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 PPT2Q9UMR5 302 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 G3BP2Q9UN86 482 aaKnown RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 RUVBL1Q9Y265 456 aaKnown RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 ASF1AQ9Y294 204 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 BTRCQ9Y297 605 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 TIMM22Q9Y584 194 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 ST14Q9Y5Y6 855 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 MRPS18BQ9Y676 258 aaKnown RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 CSNK1G3Q9Y6M4 447 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.01□□□□□ -1.13
CHD4-208ENST00000540960 ANKRD36A6QL64 1941 aa8.01□□□□□ -1.13
CHD4-208ENST00000540960 LRRC14BA6NHZ5 514 aa8□□□□□ -1.13
CHD4-208ENST00000540960 NR5A2O00482 541 aa8□□□□□ -1.13
CHD4-208ENST00000540960 LSM1O15116 133 aaKnown RBP8□□□□□ -1.13
CHD4-208ENST00000540960 ZG16O60844 167 aa8□□□□□ -1.13
CHD4-208ENST00000540960 MTX2O75431 263 aa8□□□□□ -1.13
CHD4-208ENST00000540960 EEDO75530 441 aaKnown RBP8□□□□□ -1.13
CHD4-208ENST00000540960 FKBP9O95302 570 aa8□□□□□ -1.13
CHD4-208ENST00000540960 SOD1P00441 154 aa8□□□□□ -1.13
CHD4-208ENST00000540960 CSF2P04141 144 aa8□□□□□ -1.13
CHD4-208ENST00000540960 PCCBP05166 539 aa8□□□□□ -1.13
CHD4-208ENST00000540960 JUNP05412 331 aaKnown RBP8□□□□□ -1.13
CHD4-208ENST00000540960 NME1P15531 152 aaKnown RBP8□□□□□ -1.13
CHD4-208ENST00000540960 ACADLP28330 430 aa8□□□□□ -1.13
CHD4-208ENST00000540960 EEFSECP57772 596 aaKnown RBP8□□□□□ -1.13
CHD4-208ENST00000540960 TAS2R38P59533 333 aa8□□□□□ -1.13
CHD4-208ENST00000540960 ABATP80404 500 aa8□□□□□ -1.13
CHD4-208ENST00000540960 CHIT1Q13231 466 aa8□□□□□ -1.13
CHD4-208ENST00000540960 NAE1Q13564 534 aa8□□□□□ -1.13
CHD4-208ENST00000540960 FLOT2Q14254 428 aa8□□□□□ -1.13
CHD4-208ENST00000540960 INPP5AQ14642 412 aa8□□□□□ -1.13
CHD4-208ENST00000540960 KPNB1Q14974 876 aaKnown RBP8□□□□□ -1.13
CHD4-208ENST00000540960 ZNF658BQ4V348 819 aaPredicted RBP8□□□□□ -1.13
CHD4-208ENST00000540960 KHDC1Q4VXA5 237 aaKnown RBP8□□□□□ -1.13
CHD4-208ENST00000540960 IRAK1BP1Q5VVH5 260 aa8□□□□□ -1.13
CHD4-208ENST00000540960 ATG9BQ674R7 924 aa8□□□□□ -1.13
CHD4-208ENST00000540960 REP15Q6BDI9 236 aa8□□□□□ -1.13
CHD4-208ENST00000540960 CYP20A1Q6UW02 462 aa8□□□□□ -1.13
CHD4-208ENST00000540960 LCTLQ6UWM7 567 aa8□□□□□ -1.13
CHD4-208ENST00000540960 WASH2PQ6VEQ5 465 aa8□□□□□ -1.13
CHD4-208ENST00000540960 GCNT7Q6ZNI0 430 aa8□□□□□ -1.13
CHD4-208ENST00000540960 RIPOR1Q6ZS17 1223 aa8□□□□□ -1.13
CHD4-208ENST00000540960 Q6ZSR6 202 aa8□□□□□ -1.13
CHD4-208ENST00000540960 Q71RC1 249 aaPredicted RBP8□□□□□ -1.13
CHD4-208ENST00000540960 FKBP9P1Q75LS8 142 aa8□□□□□ -1.13
CHD4-208ENST00000540960 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8□□□□□ -1.133e-8■■□□□ 13.2
CHD4-208ENST00000540960 CXorf40BQ96DE9 158 aa8□□□□□ -1.13
CHD4-208ENST00000540960 ASB9Q96DX5 294 aa8□□□□□ -1.13
CHD4-208ENST00000540960 C3orf30Q96M34 536 aa8□□□□□ -1.13
CHD4-208ENST00000540960 PKP4Q99569 1192 aa8□□□□□ -1.13
CHD4-208ENST00000540960 CMKLR1Q99788 373 aa8□□□□□ -1.13
CHD4-208ENST00000540960 SGPP1Q9BX95 441 aa8□□□□□ -1.13
CHD4-208ENST00000540960 VCXQ9H320 206 aa8□□□□□ -1.13
CHD4-208ENST00000540960 LRRN3Q9H3W5 708 aa8□□□□□ -1.13
CHD4-208ENST00000540960 TUBB1Q9H4B7 451 aa8□□□□□ -1.13
CHD4-208ENST00000540960 NT5DC2Q9H857 520 aa8□□□□□ -1.13
CHD4-208ENST00000540960 GPN2Q9H9Y4 310 aaPredicted RBP8□□□□□ -1.13
CHD4-208ENST00000540960 PELI2Q9HAT8 420 aa8□□□□□ -1.13
CHD4-208ENST00000540960 PRM3Q9NNZ6 103 aa8□□□□□ -1.13
CHD4-208ENST00000540960 WASH6PQ9NQA3 447 aa8□□□□□ -1.13
CHD4-208ENST00000540960 C8orf4Q9NR00 106 aa8□□□□□ -1.13
CHD4-208ENST00000540960 GULP1Q9UBP9 304 aa8□□□□□ -1.13
CHD4-208ENST00000540960 VPS29Q9UBQ0 182 aa8□□□□□ -1.13
CHD4-208ENST00000540960 ZNHIT2Q9UHR6 403 aa8□□□□□ -1.13
CHD4-208ENST00000540960 PNMA8BQ9ULN7 279 aaPredicted RBP8□□□□□ -1.13
CHD4-208ENST00000540960 SLC22A14Q9Y267 594 aa8□□□□□ -1.13
CHD4-208ENST00000540960 SLC17A4Q9Y2C5 497 aa8□□□□□ -1.13
CHD4-208ENST00000540960 B3GALT1Q9Y5Z6 326 aa8□□□□□ -1.13
CHD4-208ENST00000540960 HS3ST3A1Q9Y663 406 aa8□□□□□ -1.13
CHD4-208ENST00000540960 RNF215Q9Y6U7 377 aa8□□□□□ -1.13
CHD4-208ENST00000540960 MAP3K7O43318 606 aa7.99□□□□□ -1.13
CHD4-208ENST00000540960 RAD1O60671 282 aa7.99□□□□□ -1.13
CHD4-208ENST00000540960 ERN1O75460 977 aaKnown RBP7.99□□□□□ -1.13
CHD4-208ENST00000540960 BCAS2O75934 225 aaPredicted RBP7.99□□□□□ -1.13
CHD4-208ENST00000540960 KCNH1O95259 989 aa7.99□□□□□ -1.13
CHD4-208ENST00000540960 SLC16A8O95907 504 aa7.99□□□□□ -1.13
CHD4-208ENST00000540960 PAK4O96013 591 aaPredicted RBP7.99□□□□□ -1.13
CHD4-208ENST00000540960 CELA2BP08218 269 aaPredicted RBP7.99□□□□□ -1.13
CHD4-208ENST00000540960 C1GALT1C1LP0DN25 315 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms