RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 DUSP16Q9BY84 665 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 PRO1933Q9H354 126 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 CACNG2Q9Y698 323 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 J3KTA2 159 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 SAP18O00422 153 aaKnown RBP10.7□□□□□ -0.7
PBX1-212ENST00000540236 CSF3P09919 207 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 TGFB3P10600 412 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 INSRRP14616 1297 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 MAPKAPK2P49137 400 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 SEC23BQ15437 767 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 PRR5LQ6MZQ0 368 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 POGLUT1Q8NBL1 392 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 MRPS31Q92665 395 aaKnown RBP10.7□□□□□ -0.7
PBX1-212ENST00000540236 OR2A14Q96R47 310 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 NPAS1Q99742 590 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 TEX10Q9NXF1 929 aaPredicted RBP10.7□□□□□ -0.7
PBX1-212ENST00000540236 TAS2R7Q9NYW3 318 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 FZD10Q9ULW2 581 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 GPR52Q9Y2T5 361 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 NFASCO94856 1347 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 CNTNAP1P78357 1384 aa10.7□□□□□ -0.7
PBX1-212ENST00000540236 FAM155AB1AL88 458 aaPredicted RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 PAICSP22234 425 aaKnown RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 MMP12P39900 470 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 MLLT1Q03111 559 aaPredicted RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 EMX2Q04743 252 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 FUNDC1Q8IVP5 155 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 SAP130Q9H0E3 1048 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 FBRSQ9HAH7 460 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 PXMP2Q9NR77 195 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 TLR8Q9NR97 1041 aaKnown RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 CLDN24A6NM45 220 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 GPR25O00155 361 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 DCLK1O15075 740 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 CLTBP09497 229 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 PPP4CP60510 307 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 DSC2Q02487 901 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 PLA2G7Q13093 441 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 Q3ZCU0 254 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 PRAMEF19Q5SWL8 479 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 VASNQ6EMK4 673 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 TRILQ7L0X0 811 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 GPALPP1Q8IXQ4 340 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 CLRN3Q8NCR9 226 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 OLIG1Q8TAK6 271 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 WNT2BQ93097 391 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 GLIS2Q9BZE0 524 aaPredicted RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 REEP4Q9H6H4 257 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 RC3H2Q9HBD1 1191 aaKnown RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 SRRDQ9UH36 339 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 ZNF639Q9UID6 485 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 DIMT1Q9UNQ2 313 aaKnown RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 AP1M2Q9Y6Q5 423 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 HAS3O00219 553 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 GBX2P52951 348 aaPredicted RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 PURAQ00577 322 aaKnown RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 TECRLQ5HYJ1 363 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 FAM180BQ6P0A1 224 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 KDELC1Q6UW63 502 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 FDXACB1Q9BRP7 624 aaPredicted RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 THAP7Q9BT49 309 aaPredicted RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 ZYG11BQ9C0D3 744 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 CHRDQ9H2X0 955 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 TM9SF3Q9HD45 589 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 GJA3Q9Y6H8 435 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 AKAP12Q02952 1782 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 A0A1B0GV90 55 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 LINC00587B1AMM8 73 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 PDHXO00330 501 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 SHOXO15266 292 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 HIST1H2AGP0C0S8 130 aaPredicted RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 HIST1H2ADP20671 130 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 PRKAG1P54619 331 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 IL2P60568 153 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 MAD2L1Q13257 205 aaPredicted RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 VARS2Q5ST30 1063 aaKnown RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 PAQR3Q6TCH7 311 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 TMIGD1Q6UXZ0 262 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 CELF5Q8N6W0 485 aaKnown RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 HIST1H2AHQ96KK5 128 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 HIST1H2AJQ99878 128 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 H2AFJQ9BTM1 129 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 TNPO3Q9Y5L0 923 aaKnown RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 MEIS3P1A6NDR6 274 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 CBLBQ13191 982 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 NAA40Q86UY6 237 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 HJURPQ8NCD3 748 aaPredicted RBP10.69□□□□□ -0.7
PBX1-212ENST00000540236 DENND6BQ8NEG7 585 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 OR13C4Q8NGS5 318 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 POLLQ9UGP5 575 aa10.69□□□□□ -0.7
PBX1-212ENST00000540236 ANKRD28O15084 1053 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 UGT2B7P16662 529 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 MAPK1P28482 360 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 ZNF132P52740 706 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 ISL1P61371 349 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 CHAF1BQ13112 559 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 FAM98CQ17RN3 349 aaKnown RBP10.68□□□□□ -0.7
PBX1-212ENST00000540236 LY6KQ17RY6 165 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 SLC5A12Q1EHB4 618 aa10.68□□□□□ -0.7
PBX1-212ENST00000540236 TCTE1Q5JU00 501 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms