RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 MAGEB10Q96LZ2 347 aaPredicted RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 MTERF1Q99551 399 aaKnown RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 SH3GL2Q99962 352 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 GATA5Q9BWX5 397 aaPredicted RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 SLC29A3Q9BZD2 475 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 REXO4Q9GZR2 422 aaKnown RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 ANKHQ9HCJ1 492 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 GPN3Q9UHW5 284 aaPredicted RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 ADGRE2Q9UHX3 823 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 PPT2Q9UMR5 302 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 CDC14AQ9UNH5 594 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 FARSAQ9Y285 508 aaKnown RBP6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 PADI2Q9Y2J8 665 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 MAP4K5Q9Y4K4 846 aa6.61□□□□□ -1.35
LPCAT3-209ENST00000540060 BSNQ9UPA5 3926 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 CPAMD8Q8IZJ3 1885 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 SPENQ96T58 3664 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 A0A0G2JN53 185 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 TMEM120BA0PK00 339 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 VSTM2BA6NLU5 285 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF891A8MT65 544 aaPredicted RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 MAGEB17A8MXT2 336 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 SGK494L7N484 410 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 FOXE1O00358 373 aaPredicted RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 TRIM13O60858 407 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 SCELO95171 688 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ETHE1O95571 254 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ESRRBO95718 433 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 RECKO95980 971 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ENO1P06733 434 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 BPGMP07738 259 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 UMODP07911 640 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 CD63P08962 238 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 FURINP09958 794 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ZGLP1P0C6A0 271 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ARRB2P32121 409 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 FOLR3P41439 243 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 SERPINB4P48594 390 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 NEK2P51955 445 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 EFNA3P52797 238 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 SLC18A1P54219 525 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 FOXA1P55317 472 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 MAGOHP61326 146 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 RPS13P62277 151 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 SKP1P63208 163 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 CXADRP78310 365 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 PHEXP78562 749 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 VAC14Q08AM6 782 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ASPHQ12797 758 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 UGT8Q16880 541 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 COL28A1Q2UY09 1125 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 TTMPQ5BVD1 217 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 VWA2Q5GFL6 755 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 CFAP157Q5JU67 520 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 TCHHL1Q5QJ38 904 aaPredicted RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ATP1A1-AS1Q5TC04 95 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 MLIPQ5VWP3 458 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 KHDRBS2Q5VWX1 349 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 FRG2Q64ET8 278 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 TRIM40Q6P9F5 258 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ABHD17CQ6PCB6 329 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ZCCHC23Q6ZST2 131 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 UBE3DQ7Z6J8 389 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ZC3H7AQ8IWR0 971 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 CDYL2Q8N8U2 506 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 OR5T3Q8NGG3 340 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 OR6Y1Q8NGX8 325 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 STT3BQ8TCJ2 826 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ADAMTS17Q8TE56 1095 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ARL8AQ96BM9 186 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 PKNOX2Q96KN3 472 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ATP6V1G3Q96LB4 118 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 QRFPRQ96P65 431 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 FRG2BQ96QU4 278 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 F2RL3Q96RI0 385 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 KCNA7Q96RP8 456 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 TRMOQ9BU70 441 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF717Q9BY31 904 aaPredicted RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 TGIF2Q9GZN2 237 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 OR51B5Q9H339 312 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ELOVL6Q9H5J4 265 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 PRORYQ9H606 182 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 SOX17Q9H6I2 414 aaPredicted RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 TNFRSF12AQ9NP84 129 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 MID1IP1Q9NPA3 183 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 MKKSQ9NPJ1 570 aaPredicted RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 FARSBQ9NSD9 589 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 C14orf105Q9NVL8 296 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF446Q9NWS9 450 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 PSD3Q9NYI0 1048 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 HCN3Q9P1Z3 774 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 TRPC4Q9UBN4 977 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ZNF282Q9UDV7 671 aaPredicted RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 NXT1Q9UKK6 140 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 PTRH2Q9Y3E5 179 aaKnown RBP6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 PCDHGA10Q9Y5H3 936 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 ATRXP46100 2492 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 CFAP46Q8IYW2 2715 aa6.6□□□□□ -1.35
LPCAT3-209ENST00000540060 IGSF10Q6WRI0 2623 aa6.59□□□□□ -1.35
LPCAT3-209ENST00000540060 A0A088AWK7 358 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms