RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 FASLGP48023 281 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 LIPEQ05469 1076 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 PDE7AQ13946 482 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 SIM2Q14190 667 aaPredicted RBP16.11■□□□□ 0.17
COPS3-212ENST00000539941 DUOXA1Q1HG43 343 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 ADPRMQ3LIE5 342 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 RABL3Q5HYI8 236 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 OR4F3Q6IEY1 312 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 FAM71E1Q6IPT2 247 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 NCCRP1Q6ZVX7 275 aaPredicted RBP16.11■□□□□ 0.17
COPS3-212ENST00000539941 PDSS2Q86YH6 399 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 PLD3Q8IV08 490 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 FAM20CQ8IXL6 584 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 FAM156AQ8NDB6 213 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 VPS37AQ8NEZ2 397 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 BHLHE22Q8NFJ8 381 aaPredicted RBP16.11■□□□□ 0.17
COPS3-212ENST00000539941 OR7A2PQ8NGA2 310 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 LMX1AQ8TE12 382 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 ZUFSPQ96AP4 578 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 THAP11Q96EK4 314 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 TRIM15Q9C019 465 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 BHLHE41Q9C0J9 482 aaPredicted RBP16.11■□□□□ 0.17
COPS3-212ENST00000539941 PAIP1Q9H074 479 aaKnown RBP16.11■□□□□ 0.17
COPS3-212ENST00000539941 Q9H521 79 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 ALG2Q9H553 416 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 TMEM165Q9HC07 324 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 TUBA8Q9NY65 449 aaPredicted RBP16.11■□□□□ 0.17
COPS3-212ENST00000539941 VAPAQ9P0L0 249 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 DOLKQ9UPQ8 538 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 NEUROG3Q9Y4Z2 214 aa16.11■□□□□ 0.17
COPS3-212ENST00000539941 SNRNP200O75643 2136 aaKnown RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 TDRD6O60522 2096 aaKnown RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 GSAPA4D1B5 854 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 LRIT2A6NDA9 550 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 GABRR3A8MPY1 467 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 B4DGG1 531 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 LMO7DNF2Z398 122 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 GALR2O43603 387 aaPredicted RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 PEX1O43933 1283 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 SCN2BO60939 215 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 CBFA2T3O75081 653 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 TDGF1P13385 188 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 HOXB9P17482 250 aaPredicted RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 DDX5P17844 614 aaKnown RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 POLR2CP19387 275 aaPredicted RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 GSK3BP49841 420 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 CHN2P52757 468 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 WNT3P56703 355 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 TRA2BP62995 288 aaKnown RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 TEAD4Q15561 434 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 FXNQ16595 210 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 RUNDC3AQ59EK9 446 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 CCNYL2Q5T2Q4 361 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 SPESP1Q6UW49 350 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 OOSP2Q86WS3 158 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 PTRH1Q86Y79 214 aaKnown RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 SRFBP1Q8NEF9 429 aaKnown RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 ZNF548Q8NEK5 533 aaPredicted RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 OR10G6Q8NH81 332 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 KCTD14Q9BQ13 255 aaPredicted RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 DDX31Q9H8H2 851 aaKnown RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 ERVMER34-1Q9H9K5 563 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.1■□□□□ 0.17
COPS3-212ENST00000539941 BTNL2Q9UIR0 455 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 CROCCQ5TZA2 2017 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 GON4LQ3T8J9 2241 aa16.1■□□□□ 0.17
COPS3-212ENST00000539941 PRSS51A0A1B0GVH4 220 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 RFXANKO14593 260 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 YY2O15391 372 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 AQP9O43315 295 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 DFNA5O60443 496 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 TBX19O60806 448 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 KLHL18O94889 574 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 FURINP09958 794 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 LAMP1P11279 417 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 HTR1EP28566 365 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 MSX2P35548 267 aaPredicted RBP16.09■□□□□ 0.17
COPS3-212ENST00000539941 TSFMP43897 325 aaKnown RBP16.09■□□□□ 0.17
COPS3-212ENST00000539941 FNTBP49356 437 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 CSNK1EP49674 416 aaKnown RBP16.09■□□□□ 0.17
COPS3-212ENST00000539941 TAS2R50P59544 299 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 KLHL35Q6PF15 583 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 DHFR2Q86XF0 187 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 MSRB3Q8IXL7 192 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 NATD1Q8N6N6 113 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 GOLM1Q8NBJ4 401 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 SLC35B4Q969S0 331 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 CCDC115Q96NT0 180 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 HRASLS2Q9NWW9 162 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 SLC25A37Q9NYZ2 338 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 ACTR3BQ9P1U1 418 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 SPAG17Q6Q759 2223 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 DMDP11532 3685 aa16.09■□□□□ 0.17
COPS3-212ENST00000539941 OR5K3A6NET4 321 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 LILRA5A6NI73 299 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 RNASET2O00584 256 aaKnown RBP16.08■□□□□ 0.17
COPS3-212ENST00000539941 LAMTOR5O43504 91 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 C8BP07358 591 aa16.08■□□□□ 0.17
COPS3-212ENST00000539941 PTPN6P29350 595 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms