RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 GSAPA4D1B5 854 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CCDC169A6NNP5 214 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 NPIPA7E9PJI5 369 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 K7EPI3 171 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 RASGRF2O14827 1237 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ZNHIT1O43257 154 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 LANCL1O43813 399 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 EDIL3O43854 480 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ACSL4O60488 711 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GRAP2O75791 330 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 IGHV4-59P01825 116 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 IGHG4P01861 327 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CHRNA1P02708 482 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 LIPFP07098 398 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FRMD6-AS1P0C7T7 363 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 NPIPA8P0DM63 369 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 HSPA8P11142 646 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ZP3P21754 424 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 IL15P40933 162 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ACAA2P42765 397 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TNNT2P45379 298 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ABCG1P45844 678 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 PCYT1AP49585 367 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SMSP52788 366 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 NDST1P52848 882 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ATP5IP56385 69 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TMEM50BP56557 158 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 EVCP57679 992 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 OR1D5P58170 312 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 NANOS2P60321 138 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ZXDBP98169 803 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SRSF4Q08170 494 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ASPHQ12797 758 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ZBTB17Q13105 803 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TRA2AQ13595 282 aaKnown RBP eCLIP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FILIP1LQ4L180 1135 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GCNT6Q5T4J0 391 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 KLHL10Q6JEL2 608 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FAM53AQ6NSI3 398 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 RTN4RL2Q86UN3 420 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF410Q86VK4 478 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ARL10Q8N8L6 244 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CCDC71LQ8N9Z2 235 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF397Q8NF99 534 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CTCFLQ8NI51 663 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 PHOSPHO2Q8TCD6 241 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 NCLNQ969V3 563 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FAM81BQ96LP2 452 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 GPR137Q96N19 417 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 F2RL3Q96RI0 385 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 RTP3Q9BQQ7 232 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 NIPSNAP3BQ9BS92 247 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF577Q9BSK1 485 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 PARD6BQ9BYG5 372 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FAM49AQ9H0Q0 323 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 RAD21L1Q9H4I0 556 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ACKR4Q9NPB9 350 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 MRPL17Q9NRX2 175 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TXNDC16Q9P2K2 825 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ATXN10Q9UBB4 475 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ANGPTL2Q9UKU9 493 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 NPIPA1Q9UND3 350 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 DUSP12Q9UNI6 340 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 PIN4Q9Y237 131 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CHKBQ9Y259 395 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 NUDCQ9Y266 331 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 KLF2Q9Y5W3 355 aaPredicted RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TNFSF12-TNFSF13A0A0A6YY99 330 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ARHGEF37A1IGU5 675 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ASB14A6NK59 587 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 C15orf61A6NNL5 157 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FPGTO14772 594 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TEX28O15482 410 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FLRT2O43155 660 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TTI1O43156 1089 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 ECE2O60344 883 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 KERAO60938 352 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TFAP2AP05549 437 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 RALAP11233 206 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 PCP11498 1178 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 KRT5P13647 590 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 DARSP14868 501 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 MARK3P27448 753 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CCKARP32238 428 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CHRNA3P32297 505 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 RPL9P32969 192 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 VHLP40337 213 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 WNT5AP41221 380 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 MMP13P45452 471 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 LTBQ06643 244 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 HNRNPDQ14103 355 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 IQCCQ4KMZ1 466 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FASTKD1Q53R41 847 aaKnown RBP0.94□□□□□ -2.26
HIF1A-204ENST00000539097 TMEM255AQ5JRV8 349 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 PM20D1Q6GTS8 502 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 SLC35E4Q6ICL7 350 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 KIAA1161Q6NSJ0 714 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 CASC4Q6P4E1 433 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 FUT10Q6P4F1 479 aa0.94□□□□□ -2.26
HIF1A-204ENST00000539097 METAP1DQ6UB28 335 aaPredicted RBP0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms