RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 CLDN22Q8N7P3 220 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 TMEM80Q96HE8 168 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 MND1Q9BWT6 205 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 POLR2J2Q9GZM3 115 aaKnown RBP16.54■□□□□ 0.24
C2CD3-213ENST00000539061 SHOXO15266 292 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 ENTPD6O75354 484 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 CLDN11O75508 207 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 OAZ2O95190 189 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 ALPIP09923 528 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 CBLP22681 906 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 NCF4Q15080 339 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 TRIM71Q2Q1W2 868 aaKnown RBP16.54■□□□□ 0.24
C2CD3-213ENST00000539061 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.54■□□□□ 0.24
C2CD3-213ENST00000539061 DDI2Q5TDH0 399 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 LYPLAL1Q5VWZ2 237 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 HSDL2Q6YN16 418 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 IQCF2Q8IXL9 164 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 RNF175Q8N4F7 328 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 ATAD1Q8NBU5 361 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 BHMTQ93088 406 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 TCF25Q9BQ70 676 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 ACER3Q9NUN7 267 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 KCTD5Q9NXV2 234 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 MOSPD1Q9UJG1 213 aa16.54■□□□□ 0.24
C2CD3-213ENST00000539061 AKR7A2O43488 359 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 CBSLP0DN79 551 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 POU1F1P28069 291 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 CBSP35520 551 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 C21orf58P58505 322 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 DGKKQ5KSL6 1271 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 CPTPQ5TA50 214 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 USP50Q70EL3 339 aaPredicted RBP16.53■□□□□ 0.24
C2CD3-213ENST00000539061 NATD1Q8N6N6 113 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 AQP11Q8NBQ7 271 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 IL4I1Q96RQ9 567 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 PIP5K1AQ99755 562 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 GTPBP2Q9BX10 602 aaKnown RBP16.53■□□□□ 0.24
C2CD3-213ENST00000539061 FZD3Q9NPG1 666 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 CRLS1Q9UJA2 301 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 RUVBL1Q9Y265 456 aaKnown RBP16.53■□□□□ 0.24
C2CD3-213ENST00000539061 ALG5Q9Y673 324 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 GREB1Q4ZG55 1949 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.53■□□□□ 0.24
C2CD3-213ENST00000539061 J3KTA2 159 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 WWP2O00308 870 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 UBL4AP11441 157 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 CRATP43155 626 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 MAP2K3P46734 347 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 HMGA2P52926 109 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 HNRNPA0Q13151 305 aaKnown RBP16.53■□□□□ 0.24
C2CD3-213ENST00000539061 ZNF177Q13360 481 aaPredicted RBP16.53■□□□□ 0.24
C2CD3-213ENST00000539061 ZXDCQ2QGD7 858 aaPredicted RBP16.53■□□□□ 0.24
C2CD3-213ENST00000539061 KLHL17Q6TDP4 642 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 PLEKHH3Q7Z736 793 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 NLGN4YQ8NFZ3 816 aaPredicted RBP16.53■□□□□ 0.24
C2CD3-213ENST00000539061 OR4M1Q8NGD0 313 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 HTATIP2Q9BUP3 242 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 AP5M1Q9H0R1 490 aa16.53■□□□□ 0.24
C2CD3-213ENST00000539061 PRAMEF25A6NGN4 478 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 SCAMP2O15127 329 aaKnown RBP16.52■□□□□ 0.24
C2CD3-213ENST00000539061 PROM1O43490 865 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 FZD6O60353 706 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 TPST2O60704 377 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 AP2A2O94973 939 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 GADD45GO95257 159 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 CYP2A6P11509 494 aaPredicted RBP16.52■□□□□ 0.24
C2CD3-213ENST00000539061 SNRPD2P62316 118 aaKnown RBP16.52■□□□□ 0.24
C2CD3-213ENST00000539061 GAB1Q13480 694 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 C1DQ13901 141 aaKnown RBP16.52■□□□□ 0.24
C2CD3-213ENST00000539061 ELOAQ14241 798 aaKnown RBP16.52■□□□□ 0.24
C2CD3-213ENST00000539061 PTCHD3Q3KNS1 767 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 ANXA8L1Q5VT79 327 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 UBE2R2Q712K3 238 aaPredicted RBP16.52■□□□□ 0.24
C2CD3-213ENST00000539061 NPAS3Q8IXF0 933 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 FAM20CQ8IXL6 584 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 C1orf52Q8N6N3 182 aaKnown RBP16.52■□□□□ 0.24
C2CD3-213ENST00000539061 IL26Q9NPH9 171 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 VPS29Q9UBQ0 182 aa16.52■□□□□ 0.24
C2CD3-213ENST00000539061 PLEKHB1Q9UF11 243 aaPredicted RBP16.52■□□□□ 0.24
C2CD3-213ENST00000539061 TRBV5-4A0A0C4DH59 114 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 A0A0U1RQF3 1178 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 GABRR3A8MPY1 467 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 FADS2P1A8MWK0 482 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 HIST1H2AGP0C0S8 130 aaPredicted RBP16.52■□□□□ 0.23
C2CD3-213ENST00000539061 HIST1H2ADP20671 130 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 AOAHP28039 575 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 UQCRC1P31930 480 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 LIMS1P48059 325 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 SLC11A2P49281 568 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 MLLT11Q13015 90 aaPredicted RBP16.52■□□□□ 0.23
C2CD3-213ENST00000539061 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.52■□□□□ 0.23
C2CD3-213ENST00000539061 ANGPTL8Q6UXH0 198 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 LINGO4Q6UY18 593 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 AMIGO1Q86WK6 493 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 PHC2Q8IXK0 858 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 LAS2Q8IYD9 372 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 ADGRG2Q8IZP9 1017 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 ZNF557Q8N988 423 aaPredicted RBP16.52■□□□□ 0.23
C2CD3-213ENST00000539061 C19orf18Q8NEA5 215 aa16.52■□□□□ 0.23
C2CD3-213ENST00000539061 PROKR2Q8NFJ6 384 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms