RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	SERINC2	Q96SA4	455 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	LPAR4	Q99677	370 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MRPL57	Q9BQC6	102 aa	Known RBP	11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CCDC77	Q9BR77	488 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TBCD	Q9BTW9	1192 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	REXO4	Q9GZR2	422 aa	Known RBP	11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	AICDA	Q9GZX7	198 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	MMP25	Q9NPA2	562 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	PRDM9	Q9NQV7	894 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	RYDEN	Q9NUL5	291 aa	Known RBP	11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	TEKT2	Q9UIF3	430 aa		11.59	□□□□□ -0.55
CLTCL1-205	ENST00000538828	CPAMD8	Q8IZJ3	1885 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	IGKV3D-11	A0A0A0MRZ8	115 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828		H0YIV9	168 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PSMD12	O00232	456 aa	Predicted RBP	11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CLDN4	O14493	209 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	FFAR3	O14843	346 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	GPR42	O15529	346 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PRMT3	O60678	531 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	JRK	O75564	520 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	STATH	P02808	62 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	GFAP	P14136	432 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	HNRNPH1	P31943	449 aa	Known RBP	11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MTTP	P55157	894 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	HSD17B7	P56937	341 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	IRF9	Q00978	393 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	BIK	Q13323	160 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ABRAXAS2	Q15018	415 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	INPP5J	Q15735	1006 aa	Predicted RBP	11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	INA	Q16352	499 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PFKFB4	Q16877	469 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TOR1AIP1	Q5JTV8	583 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ABHD17C	Q6PCB6	329 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CHSY3	Q70JA7	882 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	VN1R5	Q7Z5H4	357 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ZNF595	Q8IYB9	648 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	L3MBTL4	Q8NA19	623 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	OR7G3	Q8NG95	312 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ESAM	Q96AP7	390 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CMTM7	Q96FZ5	175 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	KCNC2	Q96PR1	638 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	NTMT1	Q9BV86	223 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	C1QTNF3	Q9BXJ4	246 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MS4A8	Q9BY19	250 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SLC29A3	Q9BZD2	475 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	VPS11	Q9H270	941 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MRPL46	Q9H2W6	279 aa	Known RBP	11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	KLHL31	Q9H511	634 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	LYRM4	Q9HD34	91 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ASH1L	Q9NR48	2969 aa	Known RBP	11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PPIE	Q9UNP9	301 aa	Known RBP	11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MRPS33	Q9Y291	106 aa	Known RBP	11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PCDHGB6	Q9Y5F9	930 aa		11.58	□□□□□ -0.56
CLTCL1-205	ENST00000538828	IQANK1	A0A1B0GTG1	560 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TCRBV16S1A1N1	A0A5B0	115 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	DYTN	A2CJ06	578 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CLEC18A	A5D8T8	446 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TRIM49D1	C9J1S8	452 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	POC1B-GALNT4	F8VUJ3	575 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	FOXE1	O00358	373 aa	Predicted RBP	11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	E2F3	O00716	465 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ERI3	O43414	337 aa	Known RBP	11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	B3GALT2	O43825	422 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ATXN8OS	P0DMR3	200 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	RAB38	P57729	211 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	RAB8A	P61006	207 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PHEX	P78562	749 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	EEF1A2	Q05639	463 aa	Known RBP	11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	UBAP2	Q5T6F2	1119 aa	Known RBP	11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	DEPDC1	Q5TB30	811 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MFSD4B	Q5TF39	518 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CLEC18B	Q6UXF7	455 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SCUBE1	Q8IWY4	988 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CA13	Q8N1Q1	262 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ARMC10	Q8N2F6	343 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TEX9	Q8N6V9	391 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CLEC18C	Q8NCF0	446 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MYRIP	Q8NFW9	859 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	OR5T3	Q8NGG3	340 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	MRRF	Q96E11	262 aa	Known RBP	11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ZNF354B	Q96LW1	612 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	CENPK	Q9BS16	269 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PRDM7	Q9NQW5	492 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	DAPP1	Q9UN19	280 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ASB1	Q9Y576	335 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ANGPTL3	Q9Y5C1	460 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PCDHGA10	Q9Y5H3	936 aa		11.57	□□□□□ -0.56
CLTCL1-205	ENST00000538828	TRAV17	A0A0B4J275	112 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	ZNF860	A6NHJ4	632 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	C4orf51	C9J302	202 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	SMIM24	O75264	130 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	VPS4B	O75351	444 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	GSTA1	P08263	222 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	RHOXF2B	P0C7M4	288 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	PTX3	P26022	381 aa	Predicted RBP	11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	GCA	P28676	217 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	GMPR	P36959	345 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	GLRB	P48167	497 aa		11.56	□□□□□ -0.56
CLTCL1-205	ENST00000538828	OR4D2	P58180	307 aa		11.56	□□□□□ -0.56

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