RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 HYAL2Q12891 473 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 KIAA0040Q15053 153 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 MAPRE2Q15555 327 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 PRAMEF17Q5VTA0 474 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 CYB5D1Q6P9G0 228 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 CYP20A1Q6UW02 462 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 TRPV3Q8NET8 790 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 OR8K5Q8NH50 307 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 SLC13A3Q8WWT9 602 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 UTP4Q969X6 686 aaKnown RBP16.38■□□□□ 0.21
CLN6-202ENST00000538696 TEX37Q96LM6 180 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 CADM1Q9BY67 442 aaKnown RBP16.38■□□□□ 0.21
CLN6-202ENST00000538696 AICDAQ9GZX7 198 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 ACTL8Q9H568 366 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 BRF2Q9HAW0 419 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 PRM3Q9NNZ6 103 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 IRAK4Q9NWZ3 460 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 ZIM2Q9NZV7 527 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 KLK13Q9UKR3 277 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 WASF3Q9UPY6 502 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 EIF3LQ9Y262 564 aaKnown RBP16.38■□□□□ 0.21
CLN6-202ENST00000538696 RUVBL1Q9Y265 456 aaKnown RBP16.38■□□□□ 0.21
CLN6-202ENST00000538696 SPTBN2O15020 2390 aa16.38■□□□□ 0.21
CLN6-202ENST00000538696 SCN3AQ9NY46 2000 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 FITM1A5D6W6 292 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 ANKRD28O15084 1053 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 POLR1CO15160 346 aaPredicted RBP16.37■□□□□ 0.21
CLN6-202ENST00000538696 GYG2O15488 501 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 CLEC3AO75596 197 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 SERPIND1P05546 499 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 SNRPB2P08579 225 aaKnown RBP16.37■□□□□ 0.21
CLN6-202ENST00000538696 KRT16P08779 473 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 ITGAXP20702 1163 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 CPOXP36551 454 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 ZFP36L2P47974 494 aaKnown RBP16.37■□□□□ 0.21
CLN6-202ENST00000538696 SNRPNP63162 240 aaKnown RBP16.37■□□□□ 0.21
CLN6-202ENST00000538696 SLC25A3Q00325 362 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 MAD2L1Q13257 205 aaPredicted RBP16.37■□□□□ 0.21
CLN6-202ENST00000538696 CAMK2BQ13554 666 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 PWP1Q13610 501 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 COL9A2Q14055 689 aaPredicted RBP16.37■□□□□ 0.21
CLN6-202ENST00000538696 IL11RAQ14626 422 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 TCTE1Q5JU00 501 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 REP15Q6BDI9 236 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 PPP1R3BQ86XI6 285 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 LIX1Q8N485 282 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 ARHGEF39Q8N4T4 335 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 ZNF655Q8N720 491 aaPredicted RBP16.37■□□□□ 0.21
CLN6-202ENST00000538696 CAMKVQ8NCB2 501 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 RNF31Q96EP0 1072 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 FCRL1Q96LA6 429 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 C10orf90Q96M02 699 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 NPAS2Q99743 824 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 MS4A8Q9BY19 250 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 SLC6A16Q9GZN6 736 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 ADGRE2Q9UHX3 823 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 SERTAD3Q9UJW9 196 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 DLGAP4Q9Y2H0 992 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 MRPS2Q9Y399 296 aaKnown RBP16.37■□□□□ 0.21
CLN6-202ENST00000538696 DCHS1Q96JQ0 3298 aa16.37■□□□□ 0.21
CLN6-202ENST00000538696 SDK2Q58EX2 2172 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 C4orf51C9J302 202 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 FBP2O00757 339 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 AIM2O14862 343 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 ZSCAN9O15535 394 aaPredicted RBP16.36■□□□□ 0.21
CLN6-202ENST00000538696 MED26O95402 600 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 SLC35G6P0C7Q6 338 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 BCKDHAP12694 445 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 CAPN3P20807 821 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 IL12AP29459 219 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 HNRNPH1P31943 449 aaKnown RBP16.36■□□□□ 0.21
CLN6-202ENST00000538696 PIK3CBP42338 1070 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 MNAT1P51948 309 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 RAB15P59190 212 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 GABREP78334 506 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 PHEXP78562 749 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 GRM7Q14831 915 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.36■□□□□ 0.21
CLN6-202ENST00000538696 TOR1AIP1Q5JTV8 583 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 C10orf62Q5T681 223 aaPredicted RBP16.36■□□□□ 0.21
CLN6-202ENST00000538696 PWWP2BQ6NUJ5 590 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 TLDC1Q6P9B6 456 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 CEACAM20Q6UY09 585 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 BPHLQ86WA6 291 aaPredicted RBP16.36■□□□□ 0.21
CLN6-202ENST00000538696 GPR135Q8IZ08 494 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 TTC29Q8NA56 475 aaPredicted RBP16.36■□□□□ 0.21
CLN6-202ENST00000538696 KCT2Q8NC54 265 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 TAAR9Q96RI9 348 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 DDA1Q9BW61 102 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 NLNQ9BYT8 704 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 POLR1BQ9H9Y6 1135 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 VPS29Q9UBQ0 182 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 PCDHGA8Q9Y5G5 932 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 B3GALT1Q9Y5Z6 326 aa16.36■□□□□ 0.21
CLN6-202ENST00000538696 C9orf172C9J069 976 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 FOXE1O00358 373 aaPredicted RBP16.35■□□□□ 0.21
CLN6-202ENST00000538696 TXNDC9O14530 226 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 GSC2O15499 205 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 SCRG1O75711 98 aa16.35■□□□□ 0.21
CLN6-202ENST00000538696 TGFB1P01137 390 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms