RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 RASSF5Q8WWW0 418 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 WBP2Q969T9 261 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 OPALINQ96PE5 141 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 OR5M11Q96RB7 305 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 C2orf49Q9BVC5 232 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-218ENST00000537641 TMEM38AQ9H6F2 299 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 SLA2Q9H6Q3 261 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 PRDM8Q9NQV8 689 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 DDX28Q9NUL7 540 aaKnown RBP11.66□□□□□ -0.54
CPSF7-218ENST00000537641 RLIMQ9NVW2 624 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 TAS2R9Q9NYW1 312 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 SEC14L4Q9UDX3 406 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 FTSJ1Q9UET6 329 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 ATP6V1HQ9UI12 483 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 GABRR3A8MPY1 467 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 CENPXA8MT69 81 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 CTDSP2O14595 271 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 SSX4O60224 188 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 GPX5O75715 221 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 DNTTP04053 509 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 SCG5P05408 212 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 CXCR2P25025 360 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 AQP1P29972 269 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 XCR1P46094 333 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 CYP4F2P78329 520 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 RAE1P78406 368 aaKnown RBP11.66□□□□□ -0.54
CPSF7-218ENST00000537641 MRPS15P82914 257 aaKnown RBP11.66□□□□□ -0.54
CPSF7-218ENST00000537641 CDH18Q13634 790 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 SCARB2Q14108 478 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 DMC1Q14565 340 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 SSX1Q16384 188 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 CRTC1Q6UUV9 634 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 VN1R5Q7Z5H4 357 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 SLC30A8Q8IWU4 369 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 NAGSQ8N159 534 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 OR8H2Q8N162 312 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 RNF175Q8N4F7 328 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 OR6K2Q8NGY2 324 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 ZNF296Q8WUU4 475 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-218ENST00000537641 ST6GAL2Q96JF0 529 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 FAM129BQ96TA1 746 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 PIP5K1AQ99755 562 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 P2RY13Q9BPV8 354 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 KCNS3Q9BQ31 491 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 ASPNQ9BXN1 380 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 FZD3Q9NPG1 666 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 PAK6Q9NQU5 681 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-218ENST00000537641 ITM2CQ9NQX7 267 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 ERVK13-1Q9NX77 482 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 PPIL1Q9Y3C6 166 aa11.66□□□□□ -0.54
CPSF7-218ENST00000537641 IQCMA0A1B0GVH7 501 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 NPIPB15A6NHN6 443 aaPredicted RBP11.65□□□□□ -0.54
CPSF7-218ENST00000537641 K7ERQ8 282 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 PRRG1O14668 218 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 SEMA3DO95025 777 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 MFN2O95140 757 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 GSTM1P09488 218 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 CD22P20273 847 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 TIA1P31483 386 aaKnown RBP eCLIP11.65□□□□□ -0.54
CPSF7-218ENST00000537641 CSTF2P33240 577 aaKnown RBP eCLIP11.65□□□□□ -0.54
CPSF7-218ENST00000537641 RPL3P39023 403 aaKnown RBP11.65□□□□□ -0.54
CPSF7-218ENST00000537641 MVDP53602 400 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 CRISP1P54107 249 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 PSPHP78330 225 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 HSPA14Q0VDF9 509 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 RAB33AQ14088 237 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 ATP13A5Q4VNC0 1218 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 XKR6Q5GH73 641 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 CRB2Q5IJ48 1285 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 TMEM201Q5SNT2 666 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 ARMC4Q5T2S8 1044 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 RNLSQ5VYX0 342 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 CNKSR3Q6P9H4 555 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 TMPRSS11AQ6ZMR5 421 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 NRARPQ7Z6K4 114 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 TSPAN33Q86UF1 283 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 BBS7Q8IWZ6 715 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 SLC39A11Q8N1S5 342 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 OXR1Q8N573 874 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 FAM46DQ8NEK8 389 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 OR9Q2Q8NGE9 314 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 SKA2Q8WVK7 121 aaPredicted RBP11.65□□□□□ -0.54
CPSF7-218ENST00000537641 ASB15Q8WXK1 588 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 CLP1Q92989 425 aaKnown RBP11.65□□□□□ -0.54
CPSF7-218ENST00000537641 MAL2Q969L2 176 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 TMEM169Q96HH4 297 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 ZNF558Q96NG5 402 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 DEPDC7Q96QD5 511 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 PHOX2BQ99453 314 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 TMEM245Q9H330 911 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 SLC25A19Q9HC21 320 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 C14orf119Q9NWQ9 140 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 LSM2Q9Y333 95 aaKnown RBP11.65□□□□□ -0.54
CPSF7-218ENST00000537641 V9GYH0 126 aa11.65□□□□□ -0.54
CPSF7-218ENST00000537641 MGAT4DA6NG13 374 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 ZNF670-ZNF695F2Z2N8 137 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 PCDH7O60245 1069 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 GADD45GO95257 159 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 OPN1SWP03999 348 aa11.64□□□□□ -0.55
CPSF7-218ENST00000537641 ANXA4P09525 319 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms