RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 BCL2L1Q07817 233 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 GRIK4Q16099 956 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 TMEM44Q2T9K0 475 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ARMC12Q5T9G4 340 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 SDHAF4Q5VUM1 108 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 VSIG10LQ86VR7 867 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 STOML3Q8TAV4 291 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ACOT12Q8WYK0 555 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 KAT2AQ92830 837 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 TCEAL4Q96EI5 215 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF607Q96SK3 696 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ZYG11BQ9C0D3 744 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 POLR2J3Q9H1A7 115 aaKnown RBP5.21□□□□□ -1.58
PTPRD-213ENST00000537002 IFT46Q9NQC8 304 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ELF5Q9UKW6 265 aaPredicted RBP5.21□□□□□ -1.58
PTPRD-213ENST00000537002 FZD4Q9ULV1 537 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ST3GAL5Q9UNP4 418 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 GPSM3Q9Y4H4 160 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 DOT1LQ8TEK3 1739 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 CPSF4LA6NMK7 179 aaKnown RBP5.21□□□□□ -1.58
PTPRD-213ENST00000537002 A8MUA0 341 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 M0R036 132 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 GATCO43716 136 aaKnown RBP5.21□□□□□ -1.58
PTPRD-213ENST00000537002 PRAF2O60831 178 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 RECQL4O94761 1208 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 POMCP01189 267 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 RRASP10301 218 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ERVK-25P63136 954 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 STK11Q15831 433 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ZCCHC12Q6PEW1 402 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 RNF165Q6ZSG1 346 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 PLEKHH3Q7Z736 793 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 CEP97Q8IW35 865 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 FTMTQ8N4E7 242 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 KLHL36Q8N4N3 616 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 IL17RCQ8NAC3 791 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 WDR48Q8TAF3 677 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 BRSK1Q8TDC3 778 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 TESCQ96BS2 214 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 GAL3ST1Q99999 423 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 OR51E2Q9H255 320 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 GALPQ9UBC7 116 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 NDRG4Q9ULP0 352 aaKnown RBP5.21□□□□□ -1.58
PTPRD-213ENST00000537002 FOCADQ5VW36 1801 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 A0A0X1KG70 313 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 CDC7O00311 574 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 GLUD1P00367 558 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 RPL4P36578 427 aaKnown RBP5.21□□□□□ -1.58
PTPRD-213ENST00000537002 KLHL22Q53GT1 634 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 SPANXN4Q5MJ08 99 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 RNLSQ5VYX0 342 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 C22orf42Q6IC83 251 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 BAIAP2L2Q6UXY1 529 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF730Q6ZMV8 503 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 CFAP77Q6ZQR2 320 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF467Q7Z7K2 595 aaPredicted RBP5.21□□□□□ -1.58
PTPRD-213ENST00000537002 NLRP8Q86W28 1048 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 TMEM17Q86X19 198 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 OR10H4Q8NGA5 316 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 COPS5Q92905 334 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 RFT1Q96AA3 541 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 OR2M2Q96R28 347 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 MCCC1Q96RQ3 725 aaPredicted RBP5.21□□□□□ -1.58
PTPRD-213ENST00000537002 MAPKAP1Q9BPZ7 522 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 MCMBPQ9BTE3 642 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 DNTTIP1Q9H147 329 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 GMEB2Q9UKD1 530 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 MYO18AQ92614 2054 aaKnown RBP5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ZNFX1Q9P2E3 1918 aaKnown RBP5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ERVH48-1M5A8F1 160 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 FZD9O00144 591 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 MSCO60682 206 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 AOC2O75106 756 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 HLA-DQA2P01906 255 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 TYRP14679 529 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ARSAP15289 507 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ATXN7L3Q14CW9 347 aaPredicted RBP5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ZBTB6Q15916 424 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 CTXN3Q4LDR2 81 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 RAB6CQ53S08 254 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 SLC25A24Q6NUK1 477 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 COMMD2Q86X83 199 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 YIPF7Q8N8F6 280 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 FAM181AQ8N9Y4 354 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 DUSP18Q8NEJ0 188 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 HRASLS5Q96KN8 279 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 IL12RB2Q99665 862 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 COLEC11Q9BWP8 271 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 RAB6CQ9H0N0 254 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 ATG10Q9H0Y0 220 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 FANCFQ9NPI8 374 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 HEBP1Q9NRV9 189 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 RAD18Q9NS91 495 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 SEC14L3Q9UDX4 400 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 TMEM5Q9Y2B1 443 aa5.21□□□□□ -1.58
PTPRD-213ENST00000537002 GREB1LQ9C091 1923 aaPredicted RBP5.2□□□□□ -1.58
PTPRD-213ENST00000537002 SMLR1H3BR10 107 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 CTDSP2O14595 271 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 LYRM1O43325 122 aa5.2□□□□□ -1.58
PTPRD-213ENST00000537002 SLC19A2O60779 497 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms