RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 ZFP69Q49AA0 526 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 FRG2Q64ET8 278 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 PIWIL3Q7Z3Z3 882 aaKnown RBP7.91□□□□□ -1.14
ABCA4-207ENST00000536513 P3H2Q8IVL5 708 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 ZNF547Q8IVP9 402 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 RHEBL1Q8TAI7 183 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 LMX1AQ8TE12 382 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 ASB11Q8WXH4 323 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 PROX1Q92786 737 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 TPD52L3Q96J77 140 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 NSMCE2Q96MF7 247 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 FRG2BQ96QU4 278 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 C17orf62Q9BQA9 187 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 TRMOQ9BU70 441 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 APOOQ9BUR5 198 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 PRRG3Q9BZD7 231 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 INIPQ9NRY2 104 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 IFT80Q9P2H3 777 aaPredicted RBP7.91□□□□□ -1.14
ABCA4-207ENST00000536513 PADI4Q9UM07 663 aa7.91□□□□□ -1.14
ABCA4-207ENST00000536513 MANBAO00462 879 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 KPNA5O15131 536 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 MBTPS2O43462 519 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 PRMT3O60678 531 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 PRKRAO75569 313 aaKnown RBP7.9□□□□□ -1.14
ABCA4-207ENST00000536513 RSL1D1O76021 490 aaKnown RBP7.9□□□□□ -1.14
ABCA4-207ENST00000536513 ADH1BP00325 375 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 HOXB3P14651 431 aaPredicted RBP7.9□□□□□ -1.14
ABCA4-207ENST00000536513 CSNK1DP48730 415 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 ST13P50502 369 aaKnown RBP7.9□□□□□ -1.14
ABCA4-207ENST00000536513 CD300CQ08708 224 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 PMS2P3Q13401 168 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 DEFB133Q30KQ1 61 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 UBE2UQ5VVX9 321 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 PRAMEF13Q5VWM6 474 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 ARMC6Q6NXE6 501 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 CHSY3Q70JA7 882 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 TECPR1Q7Z6L1 1165 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 MMP21Q8N119 569 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 RAB42Q8N4Z0 105 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 ZNF614Q8N883 585 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 TBC1D20Q96BZ9 403 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 ZHX1-C8orf76Q96EF9 292 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 LRIG1Q96JA1 1093 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 INSM2Q96T92 566 aaPredicted RBP7.9□□□□□ -1.14
ABCA4-207ENST00000536513 NELL2Q99435 816 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 TMEM121BQ9BXQ6 578 aaPredicted RBP7.9□□□□□ -1.14
ABCA4-207ENST00000536513 S1PR5Q9H228 398 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 SRMSQ9H3Y6 488 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 SOHLH2Q9NX45 425 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 ANAPC2Q9UJX6 822 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 PSME2Q9UL46 239 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 CNOT6Q9ULM6 557 aaKnown RBP7.9□□□□□ -1.14
ABCA4-207ENST00000536513 OARD1Q9Y530 152 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 TANC1Q9C0D5 1861 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 H7C0S8 307 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 MED26O95402 600 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 C8GP07360 202 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 DDX5P17844 614 aaKnown RBP7.9□□□□□ -1.14
ABCA4-207ENST00000536513 PIGFQ07326 219 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 HSPB3Q12988 150 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 SQLEQ14534 574 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 SLC9A5Q14940 896 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 LAPTM4AQ15012 233 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 PAGE3Q5JUK9 113 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 ZDHHC20Q5W0Z9 365 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 SPESP1Q6UW49 350 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 Q6ZSR9 355 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 ZDHHC13Q8IUH4 622 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 SLC15A3Q8IY34 581 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 TMIEQ8NEW7 156 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 FAR1Q8WVX9 515 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 HDAC2Q92769 488 aaKnown RBP7.9□□□□□ -1.14
ABCA4-207ENST00000536513 FATE1Q969F0 183 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 SMAD5Q99717 465 aaKnown RBP7.9□□□□□ -1.14
ABCA4-207ENST00000536513 CCDC3Q9BQI4 270 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 PHF7Q9BWX1 381 aaPredicted RBP7.9□□□□□ -1.14
ABCA4-207ENST00000536513 TRIT1Q9H3H1 467 aaKnown RBP7.9□□□□□ -1.14
ABCA4-207ENST00000536513 CTPS2Q9NRF8 586 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 TRPC4Q9UBN4 977 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 ACSL6Q9UKU0 697 aa7.9□□□□□ -1.14
ABCA4-207ENST00000536513 BTN3A3O00478 584 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 ZNF195O14628 629 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 PIP5K1CO60331 668 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 DIRAS1O95057 198 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 GNAO1P09471 354 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 IDO1P14902 403 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 GABRG2P18507 467 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 ENPP1P22413 925 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 IMPA1P29218 277 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 CRATP43155 626 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 SSR2P43308 183 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 KIR2DL1P43626 348 aaPredicted RBP7.9□□□□□ -1.15
ABCA4-207ENST00000536513 RPS9P46781 194 aaKnown RBP7.9□□□□□ -1.15
ABCA4-207ENST00000536513 MASP1P48740 699 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 RPS26P62854 115 aaKnown RBP7.9□□□□□ -1.15
ABCA4-207ENST00000536513 PRKCQQ04759 706 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 C2orf80Q0P641 193 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 TP53BP2Q13625 1128 aa7.9□□□□□ -1.15
ABCA4-207ENST00000536513 SF3B4Q15427 424 aaKnown RBP eCLIP7.9□□□□□ -1.15
ABCA4-207ENST00000536513 SPANXN2Q5MJ10 180 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms