RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 SIGLEC6O43699 453 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 ICOSLGO75144 302 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 AP2A2O94973 939 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 GADD45GO95257 159 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 IGHV2-70P01814 119 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 CYP17A1P05093 508 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 PFKMP08237 780 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 FCGR1AP12314 374 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 HSD17B1P14061 328 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 HGFP14210 728 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 FOSL2P15408 326 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 IGFBP5P24593 272 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 NMBRP28336 390 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 YWHABP31946 246 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 SOX6P35712 828 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 MAGEA3P43357 314 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 MAP2K3P46734 347 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 GNPDA1P46926 289 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 ALDH9A1P49189 494 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 FNTBP49356 437 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 SRP9P49458 86 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 RGS6P49758 472 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 AP1S2P56377 157 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 TBX4P57082 545 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 FAM189BP81408 668 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 TGIF1Q15583 401 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 ZNF528Q3MIS6 628 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 GTDC1Q4AE62 458 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 ZNF789Q5FWF6 425 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 STXBP5Q5T5C0 1151 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 LRRC66Q68CR7 880 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 CDC42EP5Q6NZY7 148 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 MSANTD2Q6P1R3 559 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 TMIGD1Q6UXZ0 262 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 BEND4Q6ZU67 534 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 LARP4Q71RC2 724 aaKnown RBP eCLIP3.58□□□□□ -1.84
MCF2-210ENST00000536274 LDB1Q86U70 411 aaPredicted RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 ATCAYQ86WG3 371 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 PROSER1Q86XN7 944 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 PHF13Q86YI8 300 aaPredicted RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 LIX1LQ8IVB5 337 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 FTMTQ8N4E7 242 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 L3MBTL4Q8NA19 623 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 COLGALT1Q8NBJ5 622 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 AKR7LQ8NHP1 331 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 UBA3Q8TBC4 463 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 HAVCR2Q8TDQ0 301 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 PIGKQ92643 395 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 FATE1Q969F0 183 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 ZSWIM3Q96MP5 696 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 APOL5Q9BWW9 433 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 SUCNR1Q9BXA5 334 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 UGT2B28Q9BY64 529 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 GSX2Q9BZM3 304 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 IL22Q9GZX6 179 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 CRISPLD1Q9H336 500 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 MROH8Q9H579 483 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 TDRD3Q9H7E2 651 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 SYNDIG1Q9H7V2 258 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 DYRK4Q9NR20 520 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 ANKEF1Q9NU02 776 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 FAM86C1Q9NVL1 165 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 COX16Q9P0S2 106 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 CDH9Q9ULB4 789 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 COL4A4P53420 1690 aaPredicted RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 DENND4AQ7Z401 1863 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 A0A0A6YYC8 382 aaPredicted RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 SLC35F4A4IF30 521 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 OR6C68A6NDL8 312 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 MROH6A6NGR9 719 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 I3L1I5 382 aaPredicted RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 GFRA2O00451 464 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 CCL22O00626 93 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 GNB5O14775 395 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 SELENOFO60613 162 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 RAD1O60671 282 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 SLC22A3O75751 556 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 CPN2P22792 545 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 HLA-DMAP28067 261 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 PPP3CCP48454 512 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 IDH2P48735 452 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 FLT3LGP49771 235 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 RGS7P49802 495 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 LIMK2P53671 638 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 CTBP2P56545 445 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 SSTP61278 116 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 YWHAEP62258 255 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 RBP5P82980 135 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 PRR5P85299 388 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 RELQ04864 619 aaPredicted RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 HNRNPA0Q13151 305 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 FADDQ13158 208 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 TDGQ13569 410 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 FRG1Q14331 258 aaKnown RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 MAD2L1BPQ15013 274 aaPredicted RBP3.58□□□□□ -1.84
MCF2-210ENST00000536274 ZSWIM7Q19AV6 140 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 GFOD2Q3B7J2 385 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 KLHL26Q53HC5 615 aa3.58□□□□□ -1.84
MCF2-210ENST00000536274 MFSD14CQ5VZR4 134 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms