RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 KRT6CP48668 564 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 HYAL2Q12891 473 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 CHAF1BQ13112 559 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 ATP1A4Q13733 1029 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 DDX39BQ13838 428 aaKnown RBP12.81□□□□□ -0.36
RPAIN-205ENST00000536255 ADPRMQ3LIE5 342 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 DEFB134Q4QY38 66 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 AGBL2Q5U5Z8 902 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 FRG2Q64ET8 278 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 LETMD1Q6P1Q0 360 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 FRMD7Q6ZUT3 714 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 VN1R5Q7Z5H4 357 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 OR2L5Q8NG80 312 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 WDR20Q8TBZ3 569 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 ZBTB9Q96C00 473 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 MIEF2Q96C03 454 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 MS4A6EQ96DS6 147 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 CNDP1Q96KN2 507 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 IP6K3Q96PC2 410 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 KCNC2Q96PR1 638 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 FRG2BQ96QU4 278 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 MTERF1Q99551 399 aaKnown RBP12.81□□□□□ -0.36
RPAIN-205ENST00000536255 SPSB2Q99619 263 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 MS4A8Q9BY19 250 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 TRIM55Q9BYV6 548 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 SLC29A3Q9BZD2 475 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 ING2Q9H160 280 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 ACBD3Q9H3P7 528 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 GSTO2Q9H4Y5 243 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 COPS7BQ9H9Q2 264 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-205ENST00000536255 DMRT3Q9NQL9 472 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 PSD3Q9NYI0 1048 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 PPT2Q9UMR5 302 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 TLN1Q9Y490 2541 aaKnown RBP12.8□□□□□ -0.36
RPAIN-205ENST00000536255 IGLV3-12A0A075B6K2 115 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 UQCRHLA0A096LP55 91 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 B8ZZF3 427 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 FFAR3O14843 346 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 GPR42O15529 346 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 CRCPO75575 148 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 OR4F21O95013 312 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 ESRRBO95718 433 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 TGFB1P01137 390 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 UQCRHP07919 91 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 ZGLP1P0C6A0 271 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 SMIM10L1P0DMW3 83 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 IL10P22301 178 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 HMOX2P30519 316 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 ALDH3A1P30838 453 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 HNRNPH1P31943 449 aaKnown RBP12.8□□□□□ -0.36
RPAIN-205ENST00000536255 SERPINB5P36952 375 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 ETV4P43268 484 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 RAP1GDS1P52306 607 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 ARFIP1P53367 373 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 PLA2G16P53816 162 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 RRADP55042 308 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 RAB8AP61006 207 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 MAGOHP61326 146 aaKnown RBP12.8□□□□□ -0.36
RPAIN-205ENST00000536255 KHDRBS2Q5VWX1 349 aaKnown RBP12.8□□□□□ -0.36
RPAIN-205ENST00000536255 MED25Q71SY5 747 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 PRSS41Q7RTY9 318 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 PPP1R32Q7Z5V6 425 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 TMEM151BQ8IW70 566 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 AMER3Q8N944 861 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 TMEM102Q8N9M5 508 aaPredicted RBP12.8□□□□□ -0.36
RPAIN-205ENST00000536255 STT3BQ8TCJ2 826 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 NACC2Q96BF6 587 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 TLCD1Q96CP7 247 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 SMIM10Q96HG1 83 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 VPS50Q96JG6 964 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 SERPINI1Q99574 410 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 TBCDQ9BTW9 1192 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 TGIF2Q9GZN2 237 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 KLHL31Q9H511 634 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 MID1IP1Q9NPA3 183 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 ACSS2Q9NR19 701 aa12.8□□□□□ -0.36
RPAIN-205ENST00000536255 BSNQ9UPA5 3926 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 VSTM2BA6NLU5 285 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 MAGEB17A8MXT2 336 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 AGPSO00116 658 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 PSMD12O00232 456 aaPredicted RBP12.79□□□□□ -0.36
RPAIN-205ENST00000536255 PEX12O00623 359 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 PPP6CO00743 305 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 BIRC5O15392 142 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 B3GALT2O43825 422 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 NPHS1O60500 1241 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 RDH16O75452 317 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 IGHEP01854 428 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 BPGMP07738 259 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 MMP11P24347 488 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 TSFMP43897 325 aaKnown RBP12.79□□□□□ -0.36
RPAIN-205ENST00000536255 SERPINB4P48594 390 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 SLC18A1P54219 525 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 MTTPP55157 894 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 RPS13P62277 151 aaKnown RBP12.79□□□□□ -0.36
RPAIN-205ENST00000536255 SNRPNP63162 240 aaKnown RBP12.79□□□□□ -0.36
RPAIN-205ENST00000536255 BTN3A2P78410 334 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 ZNF33BQ06732 778 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 CUL3Q13618 768 aa12.79□□□□□ -0.36
RPAIN-205ENST00000536255 RCN2Q14257 317 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms