RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 TRIM17Q9Y577 477 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 LTBP2Q14767 1821 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 PIPSLA2A3N6 862 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 KRT75O95678 551 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 GBAP04062 536 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 PPP5CP53041 499 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 CASP9P55211 416 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 MC1RQ01726 317 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 SPIBQ01892 262 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 TAP2Q03519 686 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 CBX3Q13185 183 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 SYT16Q17RD7 645 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 TIGD6Q17RP2 521 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 SLC5A12Q1EHB4 618 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 POM121L1PQ3SYA9 428 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 FBXO43Q4G163 708 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 ZNF605Q86T29 641 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 CCDC103Q8IW40 242 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 METTL4Q8N3J2 472 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 NFKBIDQ8NI38 313 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 PROX1Q92786 737 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 DACH2Q96NX9 599 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 ZCCHC2Q9C0B9 1178 aaKnown RBP15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 DCSTAMPQ9H295 470 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 OR51B5Q9H339 312 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 DSN1Q9H410 356 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 ZNF556Q9HAH1 456 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 ZNF451Q9Y4E5 1061 aa15.36■□□□□ 0.05
CHMP1A-202ENST00000535997 M0R082 166 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 LILRB5O75023 590 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 TNFRSF1BP20333 461 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 TGM1P22735 817 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 CD40LGP29965 261 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 SLC19A1P41440 591 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 IDH2P48735 452 aaKnown RBP15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 TAS2R50P59544 299 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 TSTA3Q13630 321 aaPredicted RBP15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 ZNF77Q15935 545 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 MPEG1Q2M385 716 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 EXOC3L2Q2M3D2 409 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 NXPE4Q6UWF7 544 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 ARMC8Q8IUR7 673 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 LRRC56Q8IYG6 542 aaPredicted RBP15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 LGI4Q8N135 537 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 KLHL23Q8NBE8 558 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 MCFD2Q8NI22 146 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 SETD7Q8WTS6 366 aaKnown RBP15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 SLC5A11Q8WWX8 675 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 GEMIN6Q8WXD5 167 aaKnown RBP15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 UBE2E3Q969T4 207 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 CIDECQ96AQ7 238 aaPredicted RBP15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 DTD2Q96FN9 168 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 AMBNQ9NP70 447 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 ACER3Q9NUN7 267 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 ENOPH1Q9UHY7 261 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 HCN4Q9Y3Q4 1203 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 TSC22D4Q9Y3Q8 395 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 A3GALT2U3KPV4 340 aa15.35■□□□□ 0.05
CHMP1A-202ENST00000535997 A0A1W2PRB8 838 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 PRAMEF25A6NGN4 478 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 KLHL18O94889 574 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 GABRB1P18505 474 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 CHI3L1P36222 383 aaPredicted RBP15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 CTSKP43235 329 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 STARD3Q14849 445 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 EIF4HQ15056 248 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 RNF130Q86XS8 419 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 WDR48Q8TAF3 677 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 COQ10AQ96MF6 247 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 COL21A1Q96P44 957 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 PIP5K1AQ99755 562 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 NIPSNAP1Q9BPW8 284 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 PSD2Q9BQI7 771 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 PNMA8BQ9ULN7 279 aaPredicted RBP15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 SH2B3Q9UQQ2 575 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 FAM32AQ9Y421 112 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 MAP4K5Q9Y4K4 846 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 C17orf113A0A1B0GUU1 675 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 ZBBXA8MT70 800 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 SAP18O00422 153 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 KLK1P06870 262 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 WEE1P30291 646 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 IRS1P35568 1242 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 XCR1P46094 333 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 GSSP48637 474 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 PCBP3P57721 371 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 ZNF404Q494X3 552 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 PRSS36Q5K4E3 855 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 IKBIPQ70UQ0 350 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 PARS2Q7L3T8 475 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 SLC30A8Q8IWU4 369 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 ZNF514Q96K75 400 aaPredicted RBP15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 WRAP53Q9BUR4 548 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 ZNF226Q9NYT6 803 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 PAIP2BQ9ULR5 123 aaKnown RBP15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 ATP11BQ9Y2G3 1177 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 IRAK3Q9Y616 596 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 WNT6Q9Y6F9 365 aa15.34■□□□□ 0.05
CHMP1A-202ENST00000535997 PI15O43692 258 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms