RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 SNRNP40Q96DI7 357 aaKnown RBP15.42■□□□□ 0.06
ATL3-202ENST00000535789 AGAP4Q96P64 663 aa15.42■□□□□ 0.06
ATL3-202ENST00000535789 QRFPRQ96P65 431 aa15.42■□□□□ 0.06
ATL3-202ENST00000535789 NPAS2Q99743 824 aa15.42■□□□□ 0.06
ATL3-202ENST00000535789 NT5DC2Q9H857 520 aa15.42■□□□□ 0.06
ATL3-202ENST00000535789 CNOT10Q9H9A5 744 aaKnown RBP15.42■□□□□ 0.06
ATL3-202ENST00000535789 PTGFRNQ9P2B2 879 aa15.42■□□□□ 0.06
ATL3-202ENST00000535789 CLDN16Q9Y5I7 305 aa15.42■□□□□ 0.06
ATL3-202ENST00000535789 USP9YO00507 2555 aaPredicted RBP15.41■□□□□ 0.06
ATL3-202ENST00000535789 IGKV3D-11A0A0A0MRZ8 115 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 LRIT2A6NDA9 550 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 SMIM23A6NLE4 172 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 FAM227AF5H4B4 570 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 TGFBR3LH3BV60 316 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 PCDH17O14917 1159 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 WFS1O76024 890 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 KLHL2O95198 593 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 GNLYP22749 145 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 MSH2P43246 934 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 SLCO1A2P46721 670 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 HNRNPFP52597 415 aaKnown RBP15.41■□□□□ 0.06
ATL3-202ENST00000535789 BTG2P78543 158 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 CHIT1Q13231 466 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 RUNX2Q13950 521 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 ABRAXAS2Q15018 415 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 SETDB1Q15047 1291 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 KRT71Q3SY84 523 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 XKR6Q5GH73 641 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 FAM219BQ5XKK7 198 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 ISLR2Q6UXK2 745 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 RIBC1Q8N443 379 aaPredicted RBP15.41■□□□□ 0.06
ATL3-202ENST00000535789 RNF175Q8N4F7 328 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 TMEM52Q8NDY8 209 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 PLPP5Q8NEB5 264 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 RHEBL1Q8TAI7 183 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 GAL3ST3Q96A11 431 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 TBC1D20Q96BZ9 403 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 ZBTB9Q96C00 473 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 PTCD3Q96EY7 689 aaKnown RBP15.41■□□□□ 0.06
ATL3-202ENST00000535789 SH3GL2Q99962 352 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 TUBB6Q9BUF5 446 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 ASF1BQ9NVP2 202 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 PSMC3IPQ9P2W1 217 aaPredicted RBP15.41■□□□□ 0.06
ATL3-202ENST00000535789 LGALS13Q9UHV8 139 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 ZNF180Q9UJW8 692 aa15.41■□□□□ 0.06
ATL3-202ENST00000535789 SPTAN1Q13813 2472 aaKnown RBP15.41■□□□□ 0.06
ATL3-202ENST00000535789 CLGNO14967 610 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 ERI3O43414 337 aaKnown RBP15.4■□□□□ 0.06
ATL3-202ENST00000535789 MAN1A2O60476 641 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 CDH16O75309 829 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 CLEC3AO75596 197 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 INHBAP08476 426 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 SFT2D3Q587I9 215 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 UBE3DQ7Z6J8 389 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 ZADH2Q8N4Q0 377 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 CATSPER1Q8NEC5 780 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 VPS50Q96JG6 964 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 BARD1Q99728 777 aaKnown RBP15.4■□□□□ 0.06
ATL3-202ENST00000535789 RHBGQ9H310 441 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 SLAMF7Q9NQ25 335 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 PLA2G3Q9NZ20 509 aa15.4■□□□□ 0.06
ATL3-202ENST00000535789 MAGEB17A8MXT2 336 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 TCP11X1B4DZS4 312 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 K7EPI3 171 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 KLHL41O60662 606 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 B4GALT2O60909 372 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 SIX3O95343 332 aaPredicted RBP15.39■□□□□ 0.05
ATL3-202ENST00000535789 F10P00742 488 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 S100BP04271 92 aaPredicted RBP15.39■□□□□ 0.05
ATL3-202ENST00000535789 SBK3P0C264 359 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 MAOAP21397 527 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 CERS1P27544 350 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 TYK2P29597 1187 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 CASP2P42575 452 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 ST13P50502 369 aaKnown RBP15.39■□□□□ 0.05
ATL3-202ENST00000535789 BTN3A2P78410 334 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 PCDH1Q08174 1060 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 MRPL49Q13405 166 aaKnown RBP15.39■□□□□ 0.05
ATL3-202ENST00000535789 ACAP2Q15057 778 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 TBCCQ15814 346 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 PLAG1Q6DJT9 500 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 PAPD4Q6PIY7 484 aaKnown RBP15.39■□□□□ 0.05
ATL3-202ENST00000535789 ZNF793Q6ZN11 406 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 QSOX2Q6ZRP7 698 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 RIPOR1Q6ZS17 1223 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 CROCCP2Q86T23 111 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 CYP4X1Q8N118 509 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 KRT78Q8N1N4 520 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 CISD2Q8N5K1 135 aaKnown RBP15.39■□□□□ 0.05
ATL3-202ENST00000535789 ZNF473Q8WTR7 871 aaKnown RBP15.39■□□□□ 0.05
ATL3-202ENST00000535789 MZB1Q8WU39 189 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 METTL21AQ8WXB1 218 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 CCT6BQ92526 530 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 CSF3RQ99062 836 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 EFCAB11Q9BUY7 163 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 CAPS2Q9BXY5 557 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 MS4A8Q9BY19 250 aa15.39■□□□□ 0.05
ATL3-202ENST00000535789 PITHD1Q9GZP4 211 aaPredicted RBP15.39■□□□□ 0.05
ATL3-202ENST00000535789 ILKAPQ9H0C8 392 aaPredicted RBP15.39■□□□□ 0.05
ATL3-202ENST00000535789 VPS11Q9H270 941 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms