RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 GOLM1Q8NBJ4 401 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 COX4I2Q96KJ9 171 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 PPM1MQ96MI6 270 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 MAP3K3Q99759 626 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 AIF1LQ9BQI0 150 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 NUDT22Q9BRQ3 303 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 TNFRSF12AQ9NP84 129 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 TMEM9Q9P0T7 183 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 ZDHHC2Q9UIJ5 367 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 TSC22D4Q9Y3Q8 395 aa11.76□□□□□ -0.53
SCARB1-204ENST00000535005 hCG_2014768A0A024R1R8 64 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 TRIM64A6NGJ6 449 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 H0YIV9 168 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 AZIN1O14977 448 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 CASC3O15234 703 aaKnown RBP11.75□□□□□ -0.53
SCARB1-204ENST00000535005 ANKRD34CP0C6C1 535 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 UROSP10746 265 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 HGFP14210 728 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 ST6GAL1P15907 406 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 MAGP20916 626 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 SLC7A1P30825 629 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 PPM1FP49593 454 aaPredicted RBP11.75□□□□□ -0.53
SCARB1-204ENST00000535005 RHDQ02161 417 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 SLBPQ14493 270 aaKnown RBP eCLIP11.75□□□□□ -0.53
SCARB1-204ENST00000535005 ZNF829Q3KNS6 432 aaPredicted RBP11.75□□□□□ -0.53
SCARB1-204ENST00000535005 C10orf62Q5T681 223 aaPredicted RBP11.75□□□□□ -0.53
SCARB1-204ENST00000535005 VWA5B1Q5TIE3 1220 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 FAM92BQ6ZTR7 304 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 KMT5CQ86Y97 462 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 LAS2Q8IYD9 372 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 KIAA2013Q8IYS2 634 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 KRT78Q8N1N4 520 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 ANKFN1Q8N957 763 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 KLHL6Q8WZ60 621 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 UBE2E3Q969T4 207 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 CDK15Q96Q40 435 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 GFM1Q96RP9 751 aaKnown RBP11.75□□□□□ -0.53
SCARB1-204ENST00000535005 TOR4AQ9NXH8 423 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 ZNF490Q9ULM2 529 aaPredicted RBP11.75□□□□□ -0.53
SCARB1-204ENST00000535005 TRAF6Q9Y4K3 522 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 PCDHGA11Q9Y5H2 935 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 UNC13CQ8NB66 2214 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 PCNX2A6NKB5 2137 aa11.75□□□□□ -0.53
SCARB1-204ENST00000535005 TRBC2A0A5B9 178 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 SLC9B1P1A6NJY1 282 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 TRPC5OSA6NMA1 111 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 SLC30A4O14863 429 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 RFPL3O75679 317 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 DKK1O94907 266 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 ZBTB11O95625 1053 aaPredicted RBP11.74□□□□□ -0.53
SCARB1-204ENST00000535005 CAPN1P07384 714 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 PVRP15151 417 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 MPSTP25325 297 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 ZNF33BQ06732 778 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 HIST2H2ACQ16777 129 aaPredicted RBP11.74□□□□□ -0.53
SCARB1-204ENST00000535005 UGT3A2Q3SY77 523 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 CACHD1Q5VU97 1274 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 KANK2Q63ZY3 851 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 HIST2H2AA3Q6FI13 130 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 MED27Q6P2C8 311 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 FBXO42Q6P3S6 717 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 HACD2Q6Y1H2 254 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 RNF165Q6ZSG1 346 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 TMPRSS9Q7Z410 1059 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 GPR180Q86V85 440 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 SLITRK4Q8IW52 837 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 CDYL2Q8N8U2 506 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 DCBLD1Q8N8Z6 715 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 DEFB124Q8NES8 71 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 METTL6Q8TCB7 284 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 RCN3Q96D15 328 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 THAP11Q96EK4 314 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 TCTN2Q96GX1 697 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 FAR2Q96K12 515 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 DOK1Q99704 481 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 YTHDF1Q9BYJ9 559 aaKnown RBP11.74□□□□□ -0.53
SCARB1-204ENST00000535005 SHCBP1LQ9BZQ2 653 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 SPNS1Q9H2V7 528 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 RHBGQ9H310 441 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 PILRAQ9UKJ1 303 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 ATXN7L1Q9ULK2 861 aaPredicted RBP11.74□□□□□ -0.53
SCARB1-204ENST00000535005 BTRCQ9Y297 605 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 KLHL20Q9Y2M5 609 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 IGHV5-51A0A0C4DH38 117 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 IGHV5-10-1A0A0J9YXX1 117 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 SERTM1A2A2V5 107 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 TRIM64BA6NI03 449 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 D6RAR5 112 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 STAMBPO95630 424 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 GSTM2P28161 218 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 GRK3P35626 688 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 ARL1P40616 181 aaPredicted RBP11.74□□□□□ -0.53
SCARB1-204ENST00000535005 FOXA1P55317 472 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 ZFP36L1Q07352 338 aaKnown RBP11.74□□□□□ -0.53
SCARB1-204ENST00000535005 STX5Q13190 355 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 TRA2AQ13595 282 aaKnown RBP eCLIP11.74□□□□□ -0.53
SCARB1-204ENST00000535005 TRIM25Q14258 630 aaKnown RBP11.74□□□□□ -0.53
SCARB1-204ENST00000535005 ZIC1Q15915 447 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 TMIGD1Q6UXZ0 262 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 RNF44Q7L0R7 432 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms