RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 C10orf82Q8WW14 230 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 HTRA1Q92743 480 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CPNE2Q96FN4 548 aaPredicted RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 GFM1Q96RP9 751 aaKnown RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 G6PC3Q9BUM1 346 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CPEB1Q9BZB8 566 aaKnown RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 DNMT3AQ9Y6K1 912 aaPredicted RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 NPIPA2E9PIF3 369 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 NPIPA3F8WFD2 350 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ITGA5P08648 1049 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CHRM1P11229 460 aaPredicted RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ENDOUP21128 410 aaKnown RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 PTNP21246 168 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 FMO3P31513 532 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CD70P32970 193 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 GABRA3P34903 492 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 RABIFP47224 123 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 DSC1Q08554 894 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 PLCXD2Q0VAA5 305 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ZNF678Q5SXM1 525 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 REEP3Q6NUK4 255 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ARL9Q6T311 187 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 TMPPEQ6ZT21 453 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 TMEM17Q86X19 198 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ANKLE1Q8NAG6 615 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 RAB8BQ92930 207 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 HLA-CQ95604 372 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 KCNA7Q96RP8 456 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 BRF2Q9HAW0 419 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ASB6Q9NWX5 421 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 PPP4R1LQ9P1A2 415 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 GLS2Q9UI32 602 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 IGKV6-21A0A0C4DH24 114 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 H3BSH0 61 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 PLD2O14939 933 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 HOXA11P31270 313 aaPredicted RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 ACSL1P33121 698 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CATSPEREQ5SY80 951 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 FAM69BQ5VUD6 431 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 RNF111Q6ZNA4 994 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 TIFABQ6ZNK6 161 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 JAGN1Q8N5M9 183 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 CANT1Q8WVQ1 401 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 HSH2DQ96JZ2 352 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 MRGPRX2Q96LB1 330 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 MCHR1Q99705 422 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 TM9SF2Q99805 663 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 MAPKAP1Q9BPZ7 522 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 TSSK6Q9BXA6 273 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 MED28Q9H204 178 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 MEAF6Q9HAF1 191 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 FBRSL1Q9HCM7 1045 aaKnown RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 PAK6Q9NQU5 681 aaPredicted RBP6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 HCFC1R1Q9NWW0 138 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 COMMD3Q9UBI1 195 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 PCDHB14Q9Y5E9 798 aa6.16□□□□□ -1.42
UBQLN1-206ENST00000533705 MON2Q7Z3U7 1717 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 A0A1W2PPL8 197 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 GRXCR2A6NFK2 248 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 ZNF99A8MXY4 864 aaPredicted RBP6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 PTGESO14684 152 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 CHP2O43745 196 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 GADD45AP24522 165 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 CLRN1P58418 232 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 TPRG1LQ5T0D9 272 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 RPS27LQ71UM5 84 aaKnown RBP6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 ZNF572Q7Z3I7 529 aaPredicted RBP6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 TCEAL8Q8IYN2 117 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 NLGN4XQ8N0W4 816 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 AQP11Q8NBQ7 271 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 FIBINQ8TAL6 211 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.15□□□□□ -1.422e-10■■■□□ 15.7
UBQLN1-206ENST00000533705 ZNF689Q96CS4 500 aaPredicted RBP6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 DNAJA3Q96EY1 480 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 ALPK1Q96QP1 1244 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 ZNF382Q96SR6 550 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 TIGARQ9NQ88 270 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 ZNF639Q9UID6 485 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 SCML1Q9UN30 329 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 A0A1B0GVI7 797 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 LATO43561 262 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 CREG1O75629 220 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 EN2P19622 333 aaPredicted RBP6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 UQCRC2P22695 453 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 AGTR2P50052 363 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 RPS15AP62244 130 aaKnown RBP6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 GSTM4Q03013 218 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 PMS2P3Q13401 168 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 MRPL49Q13405 166 aaKnown RBP6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 TRAM2Q15035 370 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 TIGD6Q17RP2 521 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 ODF4Q2M2E3 257 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 CLLU1OSQ5K130 101 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 RAET1LQ5VY80 246 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 SMYD5Q6GMV2 418 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 THOC7Q6I9Y2 204 aaKnown RBP6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 FRMD7Q6ZUT3 714 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 MRPL10Q7Z7H8 261 aaKnown RBP6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 STX12Q86Y82 276 aa6.15□□□□□ -1.42
UBQLN1-206ENST00000533705 ZNF100Q8IYN0 542 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms