RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 ARPC2O15144 300 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 DYRK3O43781 588 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 F9P00740 461 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 SERPINA3P01011 423 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 HSD17B1P14061 328 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 IMPDH1P20839 514 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 PNPLA4P41247 253 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 YAP1P46937 504 aaKnown RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 RPL34P49207 117 aaKnown RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 NDUFV1P49821 464 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 TAF6P49848 677 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 CLCN5P51795 746 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 MLLT10P55197 1068 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 S100A12P80511 92 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 IFITM3Q01628 133 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 GNA12Q03113 381 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 TNK2Q07912 1038 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 FCHO2Q0JRZ9 810 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 IRF3Q14653 427 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ZNF846Q147U1 533 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 CDK10Q15131 360 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 PAN2Q504Q3 1202 aaKnown RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 TECRLQ5HYJ1 363 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 AFMIDQ63HM1 303 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 TIGD7Q6NT04 549 aaPredicted RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ZNF773Q6PK81 442 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 PLEKHG7Q6ZR37 379 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 KIAA0408Q6ZU52 694 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 LARP4Q71RC2 724 aaKnown RBP eCLIP5.22□□□□□ -1.571e-6■■□□□ 13.2
CKAP5-212ENST00000533413 RPS27LQ71UM5 84 aaKnown RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ERN2Q76MJ5 926 aaKnown RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 TAS2R42Q7RTR8 314 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 SPRED1Q7Z699 444 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 MON1AQ86VX9 555 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ZC3H7AQ8IWR0 971 aaKnown RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 RYBPQ8N488 228 aaPredicted RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ATPAF2Q8N5M1 289 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 B3GALNT2Q8NCR0 500 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 C2CD4AQ8NCU7 369 aaPredicted RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ZNF680Q8NEM1 530 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 MAFAQ8NHW3 353 aaPredicted RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ZNF596Q8TC21 504 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 RAB2BQ8WUD1 216 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 MYLIPQ8WY64 445 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 MAP6Q96JE9 813 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 PTCHD1Q96NR3 888 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ZFYVE21Q9BQ24 234 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 NAA50Q9GZZ1 169 aaKnown RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 QRSL1Q9H0R6 528 aaKnown RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 AKTIPQ9H8T0 292 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 IL21RQ9HBE5 538 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ENTPD7Q9NQZ7 604 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 OR12D3Q9UGF7 316 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 DAPK2Q9UIK4 370 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 FBXW11Q9UKB1 542 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 TCAF1Q9Y4C2 921 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 IRAK3Q9Y616 596 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 PMF1-BGLAPU3KQ54 211 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 TSC2P49815 1807 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 PRR23AA6NEV1 266 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 DBX1A6NMT0 343 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 CLDN5O00501 218 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 EREGO14944 169 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 CASC3O15234 703 aaKnown RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ICAM2P13598 275 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 GFAPP14136 432 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 PFKLP17858 780 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 LBPP18428 481 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 GPX3P22352 226 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 CSRP3P50461 194 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 TPTEP56180 551 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 KCNK10P57789 538 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ERVFC1P60507 584 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 SRSF2Q01130 221 aaKnown RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ZIK1Q3SY52 487 aaPredicted RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 TRIM61Q5EBN2 209 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 PRAMEF14Q5SWL7 426 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 OTUD3Q5T2D3 398 aaPredicted RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 USP45Q70EL2 814 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 MFSD6LQ8IWD5 586 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 CPNE9Q8IYJ1 553 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 CLEC4FQ8N1N0 589 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 MFSD4AQ8N468 514 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 FAM109AQ8N4B1 249 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 NPWQ8N729 165 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 TTC29Q8NA56 475 aaPredicted RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 BPIFB6Q8NFQ5 453 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 NT5C3BQ969T7 300 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 LRRC58Q96CX6 371 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 FAM122AQ96E09 287 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 SH3YL1Q96HL8 342 aaPredicted RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 IGSF21Q96ID5 467 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 OPALINQ96PE5 141 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 SEPHS2Q99611 448 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 CITED1Q99966 193 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 SEMA3CQ99985 751 aa5.22□□□□□ -1.57
CKAP5-212ENST00000533413 PELOQ9BRX2 385 aaKnown RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 AARSD1Q9BTE6 412 aaKnown RBP5.22□□□□□ -1.57
CKAP5-212ENST00000533413 ULBP1Q9BZM6 244 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms