RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 SMIM23A6NLE4 172 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 DLX3O60479 287 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 GLRA3O75311 464 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 PCNAP12004 261 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 RNH1P13489 461 aaKnown RBP19.26■□□□□ 0.67
CCS-208ENST00000533244 KRT15P19012 456 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 TAC1P20366 129 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 ZNF10P21506 573 aaPredicted RBP19.26■□□□□ 0.67
CCS-208ENST00000533244 JAK1P23458 1154 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 PLA2G16P53816 162 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 HERVK_113P63132 956 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 EEF1A2Q05639 463 aaKnown RBP19.26■□□□□ 0.67
CCS-208ENST00000533244 RUNX2Q13950 521 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 TMEM35AQ53FP2 167 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 VWA5B1Q5TIE3 1220 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 LANCL3Q6ZV70 420 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 PTRH1Q86Y79 214 aaKnown RBP19.26■□□□□ 0.67
CCS-208ENST00000533244 RIBC1Q8N443 379 aaPredicted RBP19.26■□□□□ 0.67
CCS-208ENST00000533244 HUS1BQ8NHY5 278 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 WDR20Q8TBZ3 569 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 FAR2Q96K12 515 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 ERVK-6Q9BXR3 956 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 ZNF160Q9HCG1 818 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 DMRT3Q9NQL9 472 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 PRDM7Q9NQW5 492 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 RIC8BQ9NVN3 520 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 C5AR2Q9P296 337 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 ZNF451Q9Y4E5 1061 aa19.26■□□□□ 0.67
CCS-208ENST00000533244 NSG1A0A0A6YYJ2 146 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 MAGEB17A8MXT2 336 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 SUV39H1O43463 412 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 KLHL41O60662 606 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 SCELO95171 688 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 CLDN9O95484 217 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 ATP5F1P24539 256 aaPredicted RBP19.25■□□□□ 0.67
CCS-208ENST00000533244 RAPSNQ13702 412 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 GGTA1PQ4G0N0 100 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 DEPDC1Q5TB30 811 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 MFSD4BQ5TF39 518 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 KHDRBS2Q5VWX1 349 aaKnown RBP19.25■□□□□ 0.67
CCS-208ENST00000533244 QSOX2Q6ZRP7 698 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 ANKRD37Q7Z713 158 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 MYLK4Q86YV6 388 aaPredicted RBP19.25■□□□□ 0.67
CCS-208ENST00000533244 HPS6Q86YV9 775 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 SRFBP1Q8NEF9 429 aaKnown RBP19.25■□□□□ 0.67
CCS-208ENST00000533244 METTL21AQ8WXB1 218 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 REPS1Q96D71 796 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 CMTM7Q96FZ5 175 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 IMMP1LQ96LU5 166 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 KCNC2Q96PR1 638 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 CDK15Q96Q40 435 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 SERINC2Q96SA4 455 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 PSD3Q9NYI0 1048 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 C19orf25Q9UFG5 118 aaPredicted RBP19.25■□□□□ 0.67
CCS-208ENST00000533244 LGALS13Q9UHV8 139 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 ANAPC2Q9UJX6 822 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 PPT2Q9UMR5 302 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 B3GALT2O43825 422 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 CDC123O75794 336 aaPredicted RBP19.25■□□□□ 0.67
CCS-208ENST00000533244 TGFB1P01137 390 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 ITGA3P26006 1051 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 CRHR1P34998 444 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 CCNG1P51959 295 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 MTTPP55157 894 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 SLC18A2Q05940 514 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 TGM3Q08188 693 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 KLRB1Q12918 225 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 ZRSR2Q15696 482 aaKnown RBP19.25■□□□□ 0.67
CCS-208ENST00000533244 CPSF6Q16630 551 aaKnown RBP eCLIP19.25■□□□□ 0.67
CCS-208ENST00000533244 ZNF678Q5SXM1 525 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 ZNF793Q6ZN11 406 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 CHSY3Q70JA7 882 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 RPS27LQ71UM5 84 aaKnown RBP19.25■□□□□ 0.67
CCS-208ENST00000533244 CPEB2Q7Z5Q1 589 aaKnown RBP19.25■□□□□ 0.67
CCS-208ENST00000533244 RNF175Q8N4F7 328 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 TMEM237Q96Q45 408 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 WDR77Q9BQA1 342 aaPredicted RBP19.25■□□□□ 0.67
CCS-208ENST00000533244 TBCDQ9BTW9 1192 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 TUBB6Q9BUF5 446 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 ROPN1BQ9BZX4 212 aaPredicted RBP19.25■□□□□ 0.67
CCS-208ENST00000533244 ROGDIQ9GZN7 287 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 LHPPQ9H008 270 aa19.25■□□□□ 0.67
CCS-208ENST00000533244 ROPN1Q9HAT0 212 aaPredicted RBP19.25■□□□□ 0.67
CCS-208ENST00000533244 FASNP49327 2511 aaKnown RBP19.24■□□□□ 0.67
CCS-208ENST00000533244 IGKV3D-11A0A0A0MRZ8 115 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 A0A1B0GTL3 188 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 PROCP04070 461 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 TUBBP07437 444 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 CERS1P27544 350 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 ARFIP1P53367 373 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 PRKAA2P54646 552 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 RAB38P57729 211 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 ABRAXAS2Q15018 415 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 UNC50Q53HI1 259 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 SLC22A9Q8IVM8 553 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 PARP9Q8IXQ6 854 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 ADAMTS18Q8TE60 1221 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 TSLPQ969D9 159 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 ATP6V1E2Q96A05 226 aa19.24■□□□□ 0.67
CCS-208ENST00000533244 L3HYPDHQ96EM0 354 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms