RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 METTL2BQ6P1Q9 378 aaKnown RBP14.47□□□□□ -0.09
CPSF1-210ENST00000532935 MED27Q6P2C8 311 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 TRIM40Q6P9F5 258 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 IGFL2Q6UWQ7 119 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 TIFABQ6ZNK6 161 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 RIPOR1Q6ZS17 1223 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 LAS2Q8IYD9 372 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 CA13Q8N1Q1 262 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 ZADH2Q8N4Q0 377 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 PTGR2Q8N8N7 351 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-210ENST00000532935 Q8NA96 180 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 OR2L5Q8NG80 312 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 TSLPQ969D9 159 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 IMMP1LQ96LU5 166 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 QRFPRQ96P65 431 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 NPLQ9BXD5 320 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-210ENST00000532935 ARGLU1Q9NWB6 273 aaPredicted RBP14.47□□□□□ -0.09
CPSF1-210ENST00000532935 LUZP4Q9P127 313 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 FETUBQ9UGM5 382 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 TMCO1Q9UM00 188 aa14.47□□□□□ -0.09
CPSF1-210ENST00000532935 RP1L1Q8IWN7 2480 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-210ENST00000532935 A0A088AWK7 358 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 IQANK1A0A1B0GTG1 560 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 TTLL8A6PVC2 850 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 PSMD12O00232 456 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-210ENST00000532935 E2F3O00716 465 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 B4GALT2O60909 372 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 SMIM24O75264 130 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 PCNAP12004 261 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 ICAM2P13598 275 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 ZNF10P21506 573 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-210ENST00000532935 PIK3CGP48736 1102 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 AP2B1P63010 937 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 FOXK1P85037 733 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 RUNX2Q13950 521 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 IGFBP7Q16270 282 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 ABHD17CQ6PCB6 329 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 ISLR2Q6UXK2 745 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 QSOX2Q6ZRP7 698 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 GOLGA7Q7Z5G4 137 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 AMER2Q8N7J2 671 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 OR7G3Q8NG95 312 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 BRIX1Q8TDN6 353 aaKnown RBP14.46□□□□□ -0.09
CPSF1-210ENST00000532935 ZNF473Q8WTR7 871 aaKnown RBP14.46□□□□□ -0.09
CPSF1-210ENST00000532935 PSMF1Q92530 271 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 PHF21BQ96EK2 531 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 F2RL3Q96RI0 385 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 WDR77Q9BQA1 342 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-210ENST00000532935 MRPL57Q9BQC6 102 aaKnown RBP14.46□□□□□ -0.09
CPSF1-210ENST00000532935 MS4A8Q9BY19 250 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 MRPL46Q9H2W6 279 aaKnown RBP14.46□□□□□ -0.09
CPSF1-210ENST00000532935 EPS8L2Q9H6S3 715 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 PRM3Q9NNZ6 103 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 SLAMF7Q9NQ25 335 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 PSMC3IPQ9P2W1 217 aaPredicted RBP14.46□□□□□ -0.09
CPSF1-210ENST00000532935 B3GNT3Q9Y2A9 372 aa14.46□□□□□ -0.09
CPSF1-210ENST00000532935 FAM227AF5H4B4 570 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 STX16-NPEPL1H3BU86 382 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 STX16O14662 325 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 B3GALT2O43825 422 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 PRMT3O60678 531 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 ITGAMP11215 1152 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 EEF1DP29692 281 aaKnown RBP14.45□□□□□ -0.1
CPSF1-210ENST00000532935 SERPINB1P30740 379 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 SOX11P35716 441 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 BTG2P78543 158 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 ACTN3Q08043 901 aaPredicted RBP14.45□□□□□ -0.1
CPSF1-210ENST00000532935 TGM3Q08188 693 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 MFAP5Q13361 173 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 PLEKHN1Q494U1 663 aaPredicted RBP14.45□□□□□ -0.1
CPSF1-210ENST00000532935 SFT2D3Q587I9 215 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 CRB2Q5IJ48 1285 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 LIPJQ5W064 366 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 PLAG1Q6DJT9 500 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 LINC00696Q6ZRV3 163 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 MTERF4Q7Z6M4 381 aaKnown RBP14.45□□□□□ -0.1
CPSF1-210ENST00000532935 MYLK4Q86YV6 388 aaPredicted RBP14.45□□□□□ -0.1
CPSF1-210ENST00000532935 SIRT6Q8N6T7 355 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 PPP4R1Q8TF05 950 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.45□□□□□ -0.1
CPSF1-210ENST00000532935 MIB2Q96AX9 1013 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 PTCHD1Q96NR3 888 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 LMF1Q96S06 567 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 SERINC2Q96SA4 455 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 CCDC77Q9BR77 488 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 IPPKQ9H8X2 491 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 ANKZF1Q9H8Y5 726 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 ACTR8Q9H981 624 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 PRDM7Q9NQW5 492 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 PTGFRNQ9P2B2 879 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 RAB21Q9UL25 225 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 PLAAQ9Y263 795 aa14.45□□□□□ -0.1
CPSF1-210ENST00000532935 UGDHO60701 494 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 CERS1P27544 350 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 MTTPP55157 894 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 RAB38P57729 211 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 OR4D2P58180 307 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 KCNC4Q03721 635 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 EXT1Q16394 746 aa14.44□□□□□ -0.1
CPSF1-210ENST00000532935 BTBD16Q32M84 506 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms