RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 TRIB3Q96RU7 358 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 PKP4Q99569 1192 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 CXorf21Q9HAI6 301 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF432O94892 652 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 HNRNPKP61978 463 aaKnown RBP eCLIP14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 CHAF1BQ13112 559 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 MARCH8Q5T0T0 291 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 THOC7Q6I9Y2 204 aaKnown RBP14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 ASPGQ86U10 573 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 CHST14Q8NCH0 376 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 DAZLQ92904 295 aaKnown RBP14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 TOP1MTQ969P6 601 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 IMP4Q96G21 291 aaKnown RBP14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 G6PC3Q9BUM1 346 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 APOBEC3BQ9UH17 382 aaKnown RBP14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 RIMKLBQ9ULI2 386 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 CACNA1SQ13698 1873 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 A6NCN8 305 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 H3BSH0 61 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 AREL1O15033 823 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 SCGNO76038 276 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 SLC6A6P31641 620 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 GALK1P51570 392 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 LIPJQ5W064 366 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 PSAPL1Q6NUJ1 521 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 MRPL10Q7Z7H8 261 aaKnown RBP14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 NPWQ8N729 165 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 OR9I1Q8NGQ6 314 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 SCGB3A2Q96PL1 93 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF639Q9UID6 485 aa14.26□□□□□ -0.13
PCDHA9-202ENST00000532602 MYH4Q9Y623 1939 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 IL33O95760 270 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 S100A9P06702 114 aaKnown RBP14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 MAGP20916 626 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 CD72P21854 359 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 MATN1P21941 496 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 RBMS1P29558 406 aaKnown RBP14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 POU6F2P78424 691 aaPredicted RBP14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 AKAP14Q86UN6 197 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 PACRGLQ8N7B6 248 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 THAP3Q8WTV1 239 aaPredicted RBP14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 PTCHD1Q96NR3 888 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 NSUN5Q96P11 429 aaKnown RBP14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 NPPAP01160 153 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 PPP1R8Q12972 351 aaKnown RBP14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 RIN1Q13671 783 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 FTSJ1Q9UET6 329 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 KLF11O14901 512 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 KCNJ13O60928 360 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 OAZ2O95190 189 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 RAB36O95755 333 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 ASGR2P07307 311 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 PUDPQ08623 228 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 PCLAFQ15004 111 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 CST6Q15828 149 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 TIFABQ6ZNK6 161 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 TMPRSS9Q7Z410 1059 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 HMGN2P46Q86SG4 172 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 C3orf58Q8NDZ4 430 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 NELL2Q99435 816 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 GORASP1Q9BQQ3 440 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 UCK2Q9BZX2 261 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 BRD7Q9NPI1 651 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 PDLIM7Q9NR12 457 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 TBC1D24Q9ULP9 559 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 MATN2O00339 956 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 ARPC2O15144 300 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 C6P13671 934 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 C5AR1P21730 350 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 FMO3P31513 532 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 MRPL49Q13405 166 aaKnown RBP14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 RAB33AQ14088 237 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 LASP1Q14847 261 aaKnown RBP14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 SPATS1Q496A3 300 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 FRMD6Q96NE9 622 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 ASB6Q9NWX5 421 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 FBXO9Q9UK97 447 aaPredicted RBP14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 PRKD3O94806 890 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 PGAM2P15259 253 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 OR12D2P58182 307 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 RPL19P84098 196 aaKnown RBP14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 KHDC1Q4VXA5 237 aaKnown RBP14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 ZNF678Q5SXM1 525 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 IDNKQ5T6J7 187 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 C15orf39Q6ZRI6 1047 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 LINGO2Q7L985 606 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 SIGLEC10Q96LC7 697 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 COQ10BQ9H8M1 238 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 TIMMDC1Q9NPL8 285 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 IFT52Q9Y366 437 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 MAU2Q9Y6X3 613 aa14.25□□□□□ -0.13
PCDHA9-202ENST00000532602 APOC1P02654 83 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 ROR2Q01974 943 aaKnown RBP14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 PPP1R3AQ16821 1122 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 USP43Q70EL4 1123 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 RABEPKQ7Z6M1 372 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 YIPF7Q8N8F6 280 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 RPLP0P6Q8NHW5 317 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 RAB2BQ8WUD1 216 aa14.24□□□□□ -0.13
PCDHA9-202ENST00000532602 FAM3CQ92520 227 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms