RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 LNX2Q8N448 690 aa7.64□□□□□ -1.19
CTNND1-230ENST00000532245 ZNF671Q8TAW3 534 aa7.64□□□□□ -1.19
CTNND1-230ENST00000532245 SLC22A8Q8TCC7 542 aa7.64□□□□□ -1.19
CTNND1-230ENST00000532245 ASB15Q8WXK1 588 aa7.64□□□□□ -1.19
CTNND1-230ENST00000532245 PDXPQ96GD0 296 aa7.64□□□□□ -1.19
CTNND1-230ENST00000532245 OR6C1Q96RD1 312 aa7.64□□□□□ -1.19
CTNND1-230ENST00000532245 SLC39A3Q9BRY0 314 aa7.64□□□□□ -1.19
CTNND1-230ENST00000532245 DGCR6LQ9BY27 220 aa7.64□□□□□ -1.19
CTNND1-230ENST00000532245 TM7SF3Q9NS93 570 aa7.64□□□□□ -1.19
CTNND1-230ENST00000532245 CPSF4LA6NMK7 179 aaKnown RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 BHMG1C9JSJ3 638 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 KRT36O76013 467 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 ATXN1LP0C7T5 689 aaKnown RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 CERS1P27544 350 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 PRLHRP49683 370 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 SLC18A2Q05940 514 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 TCTN1Q2MV58 587 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 TMEM196Q5HYL7 178 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 RAET1LQ5VY80 246 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 TTC23Q5W5X9 447 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 RPTNQ6XPR3 784 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 HMGN2P46Q86SG4 172 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 ADIPOR2Q86V24 386 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 KRTCAP2Q8N6L1 136 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 ZNF540Q8NDQ6 660 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 OR52E4Q8NGH9 312 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 FUBP1Q96AE4 644 aaKnown RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 ZFRQ96KR1 1074 aaKnown RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 VN1R3Q9BXE9 311 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 GPN2Q9H9Y4 310 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 TPT1P8Q9HAU6 139 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 WNT16Q9UBV4 365 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 SH3BGRL2Q9UJC5 107 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 SARDHQ9UL12 918 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 PLEKHM1Q9Y4G2 1056 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 PRSS51A0A1B0GVH4 220 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 E7ESA3 106 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 SCRG1O75711 98 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 CCNB2O95067 398 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 PRLP01236 227 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 CBLP22681 906 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 TARDBPQ13148 414 aaKnown RBP eCLIP7.63□□□□□ -1.191e-8■■■■□ 21.9
CTNND1-230ENST00000532245 TMEM35AQ53FP2 167 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 UNC50Q53HI1 259 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 OR52E8Q6IFG1 317 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 DENND6BQ8NEG7 585 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 OR4C6Q8NH72 309 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 FAM81AQ8TBF8 368 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 RACGAP1Q9H0H5 632 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 ZC4H2Q9NQZ6 224 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 POT1Q9NUX5 634 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 ZIM2Q9NZV7 527 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 PTGFRNQ9P2B2 879 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 A8MVJ9 347 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 PFDN1O60925 122 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 SYNGR4O95473 234 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 KRT8P05787 483 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 ZNF823P16415 610 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 PORP16435 677 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 OR1D5P58170 312 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 ACTR3P61158 418 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 CDK6Q00534 326 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 EMX2Q04743 252 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 SRYQ05066 204 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 DLX2Q07687 328 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 SPEM2Q0P670 501 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 GBX1Q14549 363 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 PTGR1Q14914 329 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 OAFQ86UD1 273 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 NUP43Q8NFH3 380 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 NT5C3BQ969T7 300 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 TMEM9BQ9NQ34 198 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 RASSF1Q9NS23 344 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 HPF1Q9NWY4 346 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 C5AR2Q9P296 337 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 SRPK3Q9UPE1 567 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 NOX1Q9Y5S8 564 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 SPIN1Q9Y657 262 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 HS3ST3A1Q9Y663 406 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 MFN2O95140 757 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 CHRM5P08912 532 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 ZDHHC11BP0C7U3 371 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 XCR1P46094 333 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 INAQ16352 499 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 PPP1R3AQ16821 1122 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 UBAP2Q5T6F2 1119 aaKnown RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 STEAP4Q687X5 459 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 LILRA6Q6PI73 481 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 GPAT4Q86UL3 456 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 OR2AJ1Q8NGZ0 328 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 KHSRPQ92945 711 aaKnown RBP eCLIP7.63□□□□□ -1.194e-7■■□□□ 12.3
CTNND1-230ENST00000532245 POP5Q969H6 163 aaKnown RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 BIRC7Q96CA5 298 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 FBXL8Q96CD0 374 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 OR51V1Q9H2C8 321 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 SOX17Q9H6I2 414 aaPredicted RBP7.63□□□□□ -1.19
CTNND1-230ENST00000532245 C11orf16Q9NQ32 467 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 IGLV3-10A0A075B6K4 115 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 ADAMDEC1O15204 470 aa7.63□□□□□ -1.19
CTNND1-230ENST00000532245 TBX10O75333 385 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms