RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SELENOVP59797 346 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 HERV-K104P63124 156 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 PDE1BQ01064 536 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 SRSF5Q13243 272 aaKnown RBP4□□□□□ -1.77
AC055878.1-201ENST00000531858 IL18Q14116 193 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 KEAP1Q14145 624 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 ICAM4Q14773 271 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 STK11Q15831 433 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 CMPK2Q5EBM0 449 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 PHYHD1Q5SRE7 291 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 PRAMEF17Q5VTA0 474 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 TTC23Q5W5X9 447 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 PARM1Q6UWI2 310 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 SLC16A12Q6ZSM3 486 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 FAM228AQ86W67 206 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 PAQR7Q86WK9 346 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 CDR2LQ86X02 465 aaPredicted RBP4□□□□□ -1.77
AC055878.1-201ENST00000531858 GPSM1Q86YR5 675 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 ZDHHC17Q8IUH5 632 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 CROCCP3Q8IVE0 287 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 LGI2Q8N0V4 545 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 UBE2J2Q8N2K1 259 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 TRPV3Q8NET8 790 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 OR6M1Q8NGM8 313 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 RAB3IL1Q8TBN0 382 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 IRGQQ8WZA9 623 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 PEX13Q92968 403 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 PIGTQ969N2 578 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 SARAFQ96BY9 339 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 C19orf60Q96EN9 201 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 COQ2Q96H96 371 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 OXNAD1Q96HP4 312 aaPredicted RBP4□□□□□ -1.77
AC055878.1-201ENST00000531858 RAB40CQ96S21 281 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 OMDQ99983 421 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 BCL7BQ9BQE9 202 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 ALKBH7Q9BT30 221 aaPredicted RBP4□□□□□ -1.77
AC055878.1-201ENST00000531858 FAM192AQ9GZU8 254 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 RIMS4Q9H426 269 aaPredicted RBP4□□□□□ -1.77
AC055878.1-201ENST00000531858 SLITRK6Q9H5Y7 841 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 XKR8Q9H6D3 395 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 RNF121Q9H920 327 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 VIPAS39Q9H9C1 493 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 POLD4Q9HCU8 107 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 RPRD1BQ9NQG5 326 aaKnown RBP4□□□□□ -1.77
AC055878.1-201ENST00000531858 PHPT1Q9NRX4 125 aaPredicted RBP4□□□□□ -1.77
AC055878.1-201ENST00000531858 DDX28Q9NUL7 540 aaKnown RBP4□□□□□ -1.77
AC055878.1-201ENST00000531858 EXOC1Q9NV70 894 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 RDH8Q9NYR8 311 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 SERGEFQ9UGK8 458 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 CHRNA9Q9UGM1 479 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 B9D1Q9UPM9 204 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 NIP7Q9Y221 180 aaKnown RBP eCLIP4□□□□□ -1.77
AC055878.1-201ENST00000531858 TMED3Q9Y3Q3 217 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 ZMYM2Q9UBW7 1377 aa4□□□□□ -1.77
AC055878.1-201ENST00000531858 RAD54L2Q9Y4B4 1467 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 SERTM2A0A1B0GWG4 89 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 ANTXRLA6NF34 631 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 J3KR12 359 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 DNALI1O14645 258 aaPredicted RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 RNF113AO15541 343 aaKnown RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 ADAM12O43184 909 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 BCAS1O75363 584 aaPredicted RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 CHRNA1P02708 482 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 APOHP02749 345 aaPredicted RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 CA3P07451 260 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 STAG3L3P0CL85 134 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 CTSAP10619 480 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 RALBP11234 206 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 ARSBP15848 533 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 NAGAP17050 411 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 ITGB6P18564 788 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 GPD1P21695 349 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 CDH3P22223 829 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 OR1D2P34982 312 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 CA8P35219 290 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 GRIA1P42261 906 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 THOP1P52888 689 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 GEMP55040 296 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 MLLT10P55197 1068 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 SEC61A1P61619 476 aaKnown RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 RPS18P62269 152 aaKnown RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 ZXDBP98169 803 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 HSPA14Q0VDF9 509 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 MAB21L1Q13394 359 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 CTTNQ14247 550 aaKnown RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 MESDQ14696 234 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 SPHARQ15513 63 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 ZNF284Q2VY69 593 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 GPAT3Q53EU6 434 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 MPPE1Q53F39 396 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 CARD17Q5XLA6 110 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 SNRNP48Q6IEG0 339 aaKnown RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 TRNP1Q6NT89 227 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 CWC27Q6UX04 472 aaKnown RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 Q6YL49 198 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 Q6ZPB1 254 aaPredicted RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 TRPM8Q7Z2W7 1104 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 CPEB2Q7Z5Q1 589 aaKnown RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 TMCO2Q7Z6W1 182 aaPredicted RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 MMD2Q8IY49 270 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms