RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 MAGEC3Q8TD91 643 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 ELP5Q8TE02 316 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 CHTF18Q8WVB6 975 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 METTL21AQ8WXB1 218 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 ASB11Q8WXH4 323 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 SDCCAG3Q96C92 435 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 FOPNLQ96NB1 174 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 VKORC1Q9BQB6 163 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 KIFC1Q9BW19 673 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 IL22Q9GZX6 179 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 RABEP2Q9H5N1 569 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 GPAMQ9HCL2 828 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 EIF2B3Q9NR50 452 aaKnown RBP8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 SENP1Q9P0U3 644 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 SAMD15Q9P1V8 674 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 TNFRSF10DQ9UBN6 386 aa8.63□□□□□ -1.03
CHMP4A-205ENST00000531158 MPDZO75970 2070 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 FEZF1A0PJY2 475 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 FAM221AA4D161 298 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 NKX2-6A6NCS4 301 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 ZNF860A6NHJ4 632 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 SMIM23A6NLE4 172 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 KIAA1324LA8MWY0 1029 aaPredicted RBP8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 GFYI3L273 518 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 LCMT2O60294 686 aaKnown RBP8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 AVILO75366 819 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 SLC25A12O75746 678 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 ACSL3O95573 720 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 ESR1P03372 595 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 CD46P15529 392 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 ABOP16442 354 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 ZNF24P17028 368 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 CHRM3P20309 590 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 RFC3P40938 356 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 SLC18A1P54219 525 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 SLC26A5P58743 744 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 TBPL1P62380 186 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 ABATP80404 500 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 LTBQ06643 244 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 ABRAXAS2Q15018 415 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 EMC4Q5J8M3 183 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 SLC25A25Q6KCM7 469 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 MBOAT1Q6ZNC8 495 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 CXXC5Q7LFL8 322 aaKnown RBP8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 GSTA5Q7RTV2 222 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 PIWIL4Q7Z3Z4 852 aaKnown RBP8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 EXOC3L1Q86VI1 746 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 GHDCQ8N2G8 530 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 TMEM178AQ8NBL3 297 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 PEX11GQ96HA9 241 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 TRIM45Q9H8W5 580 aaPredicted RBP8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 LRFN1Q9P244 771 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 C19orf25Q9UFG5 118 aaPredicted RBP8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 ADAMTS6Q9UKP5 1117 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 ZNF148Q9UQR1 794 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 NAALAD2Q9Y3Q0 740 aa8.62□□□□□ -1.03
CHMP4A-205ENST00000531158 KIAA1549Q9HCM3 1950 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 A0A1B0GTH9 108 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 TMEM120BA0PK00 339 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 MAGEB17A8MXT2 336 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 TXNDC9O14530 226 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 DNAJC8O75937 253 aaPredicted RBP8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 TOXO94900 526 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 CCNDBP1O95273 360 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 CATP04040 527 aaKnown RBP8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 KLK2P20151 261 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 MAGEA4P43358 317 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 SLCO1A2P46721 670 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 AGTR2P50052 363 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 OLR1P78380 273 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 TIAL1Q01085 375 aaKnown RBP eCLIP8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 OC90Q02509 493 aaPredicted RBP8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 IFT88Q13099 833 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 CBLBQ13191 982 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 TRIP13Q15645 432 aaPredicted RBP8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 NSDHLQ15738 373 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 EXT1Q16394 746 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 MAPKAPK3Q16644 382 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 NDUFA9Q16795 377 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 CMPK2Q5EBM0 449 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 UBAP2Q5T6F2 1119 aaKnown RBP8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 RNASEH2BQ5TBB1 312 aaKnown RBP8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 KIAA0930Q6ICG6 404 aaPredicted RBP8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 PACS2Q86VP3 889 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 SLC26A11Q86WA9 606 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 TGIF2LYQ8IUE0 185 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 CILP2Q8IUL8 1156 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 DENND6AQ8IWF6 608 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 LGI4Q8N135 537 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 ARMC10Q8N2F6 343 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 AGGF1Q8N302 714 aaeCLIP8.61□□□□□ -1.032e-8■□□□□ 9
CHMP4A-205ENST00000531158 AFAP1L2Q8N4X5 818 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 PLPP5Q8NEB5 264 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 FAM57AQ8TBR7 257 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 CD200R1Q8TD46 325 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 CA5BP1Q8WTZ4 195 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 CKAP2Q8WWK9 683 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 OLFM1Q99784 485 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 UCK2Q9BZX2 261 aa8.61□□□□□ -1.03
CHMP4A-205ENST00000531158 CDCP1Q9H5V8 836 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms